Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

Click here to switch to the map view.

The map label for this gene is 119386752

Identifier: 119386752

GI number: 119386752

Start: 1195503

End: 1196720

Strand: Direct

Name: 119386752

Synonym: Pden_4045

Alternate gene names: NA

Gene position: 1195503-1196720 (Clockwise)

Preceding gene: 119386751

Following gene: 119386753

Centisome position: 69.1

GC content: 70.44

Gene sequence:

>1218_bases
ATGAATGGCAGCACGGATACGACCGCAACGAAGCAGGAGCAGGGCACGCCCGGAGAGGTCTTCGCCGCCTTTCTCAAGCT
TGGCCTGACCTCCTTTGGCGGGCCGATCGCGCATCTGGGCTTTTTCCGCGACGAGTTGGTGATCCGCCGGAAATGGCTGT
CCGACCACGCCTATGCCGATCTGGTCGCGCTGTGCCAGTTCCTGCCCGGCCCGGCCTCCAGCCAGGTGGGCTTTGCCCTG
GGGCTGATGCGGGCCGGATGGCTTGGGGCCCTGGCGGCCTTTGCCGCCTTCACGCTGCCCTCGGCGATGATGCTGGTTGC
CTTTGCCCTGACGGCGAGCGCCGTTTCCGGGCCGGTCGGCGCCGGCGCCCTGCATGGGCTCAAGATCGTTGCCGTCGCCA
TCGTGGCGCAGGCCGTCTGGGGCATGGCGCGGACCCTGTGCCCGGATCGCGAACGGGCGAGCATCGCGGCGGGGGCCGTC
GCCCTGCTGGCCTTCCTGCCCGGCACCTTCGGCATGCTGGGCGCCATCGTCCTGGGCGCCGGCGCCGGGCTGATTCTGTG
CCGGGAAAGCGCGGCGCCGATCGGCGGCCATGTCTCGATGCCGGTCAGCTACGGCCAGGCGGCGATCAGCCTTGTCGCCT
TCGCGGCGCTGCTGGTCCTGCTGCCGCTGGTTGCCGGCGGATCGGGCAGCCTGGCCGTCTTCGACAGCTTCTATCGGGCC
GGTGCGCTGGTCTTTGGCGGCGGCCATGTGGTGCTGCCGCTCCTGCAAGCCGAGATGGTCGATACGGCCCGCATCCCGGC
GGATACCTTCCTGGCCGGCTATGGCGCGGCGCAGGCGGTGCCGGGGCCGCTGTTCACCTTTGCCGCCTATCTGGGCGCGG
TGCAGGGGCCCGAACCGCACGGCCTTGCGGGGGCGACCATCGCCCTTGTCGCGGTGTTCCTGCCCGGCTTCCTGATCCTG
ACCGCGATCCTGCCGTTCTGGGATCGGTTTCGGAGGATGTCGGCGATGCAATCGCTCATGCGAGGCGCCAATGCCGCCGT
CGTCGGCATCCTCGGCGCGGCCCTTTATGCGCCCGTCTTCACCAGTGCCATCGGCAGCATGCGGGATTTCGCCCTGGCGC
TTGCCTGCTTCGTGGCGCTCATCGCCTGGAAGGCGCCGCCCTGGGCGGTCGTGCTGCTGGCCGCCGCCGGGGGCATCGCG
CTCGCCCCTGCCGGCTGA

Upstream 100 bases:

>100_bases
CGAATGACGGGTTTGAAGCGCGGGACATGGGTGACATATAGTCCCGGGGACGGGGCGGTTCACATTCCGGCCAGGGGAAT
TCGAGGGTGGGGCCGAAACC

Downstream 100 bases:

>100_bases
ACCGCGGCATGGTGGTCGAGGCAAGCGAGCAAGGCATTGCAACCGTGTTTCGACCAATGGTCGAGCAAAGCCCACCGCAT
ACGCGCATGGCTTGTATGGC

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNGSTDTTATKQEQGTPGEVFAAFLKLGLTSFGGPIAHLGFFRDELVIRRKWLSDHAYADLVALCQFLPGPASSQVGFAL
GLMRAGWLGALAAFAAFTLPSAMMLVAFALTASAVSGPVGAGALHGLKIVAVAIVAQAVWGMARTLCPDRERASIAAGAV
ALLAFLPGTFGMLGAIVLGAGAGLILCRESAAPIGGHVSMPVSYGQAAISLVAFAALLVLLPLVAGGSGSLAVFDSFYRA
GALVFGGGHVVLPLLQAEMVDTARIPADTFLAGYGAAQAVPGPLFTFAAYLGAVQGPEPHGLAGATIALVAVFLPGFLIL
TAILPFWDRFRRMSAMQSLMRGANAAVVGILGAALYAPVFTSAIGSMRDFALALACFVALIAWKAPPWAVVLLAAAGGIA
LAPAG

Sequences:

>Translated_405_residues
MNGSTDTTATKQEQGTPGEVFAAFLKLGLTSFGGPIAHLGFFRDELVIRRKWLSDHAYADLVALCQFLPGPASSQVGFAL
GLMRAGWLGALAAFAAFTLPSAMMLVAFALTASAVSGPVGAGALHGLKIVAVAIVAQAVWGMARTLCPDRERASIAAGAV
ALLAFLPGTFGMLGAIVLGAGAGLILCRESAAPIGGHVSMPVSYGQAAISLVAFAALLVLLPLVAGGSGSLAVFDSFYRA
GALVFGGGHVVLPLLQAEMVDTARIPADTFLAGYGAAQAVPGPLFTFAAYLGAVQGPEPHGLAGATIALVAVFLPGFLIL
TAILPFWDRFRRMSAMQSLMRGANAAVVGILGAALYAPVFTSAIGSMRDFALALACFVALIAWKAPPWAVVLLAAAGGIA
LAPAG
>Mature_405_residues
MNGSTDTTATKQEQGTPGEVFAAFLKLGLTSFGGPIAHLGFFRDELVIRRKWLSDHAYADLVALCQFLPGPASSQVGFAL
GLMRAGWLGALAAFAAFTLPSAMMLVAFALTASAVSGPVGAGALHGLKIVAVAIVAQAVWGMARTLCPDRERASIAAGAV
ALLAFLPGTFGMLGAIVLGAGAGLILCRESAAPIGGHVSMPVSYGQAAISLVAFAALLVLLPLVAGGSGSLAVFDSFYRA
GALVFGGGHVVLPLLQAEMVDTARIPADTFLAGYGAAQAVPGPLFTFAAYLGAVQGPEPHGLAGATIALVAVFLPGFLIL
TAILPFWDRFRRMSAMQSLMRGANAAVVGILGAALYAPVFTSAIGSMRDFALALACFVALIAWKAPPWAVVLLAAAGGIA
LAPAG

Specific function: Unknown

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 41006; Mature: 41006

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]