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The map label for this gene is yafK [C]

Identifier: 119386750

GI number: 119386750

Start: 1193259

End: 1193768

Strand: Direct

Name: yafK [C]

Synonym: Pden_4043

Alternate gene names: 119386750

Gene position: 1193259-1193768 (Clockwise)

Preceding gene: 119386747

Following gene: 119386751

Centisome position: 68.97

GC content: 66.27

Gene sequence:

>510_bases
ATGATGGGCTGGCTGGGACGTATCGTCGCACTTGCGGTTCTGCTGGGGCTTGCCGCCTGCGGTCCCAGCAAGTTCAAGAC
CTATTCCGGCCCGCCCGTGACCCAGGTCGTCGTCAACAAGGGCGCGCGGCAGATGCTGCTGCTCAACGGCAACACGGTGC
TGAAGGCCTATCGCATCGGGCTGGGCAACGAGCCCCTGGGCCACAAGCAGTTCGAGGGCGACGGCAAGACCCCCGAGGGG
CTCTACTACATCGACCGCCGCAACCCCGACAGCCGCTATCACCTGTCGATCGGCATTTCCTACCCCAATCCGCATGACGC
GGTGCTGGCCAGCGAACTGGGGCGCAGCGCCGGCAGCGACATCTTCATCCACGGCCAGGGCCCCGAGGGGCGGGCGCTGT
CCAGGCTGCGCCAGGACTGGACCGCAGGCTGCATTGCCGTCACCGATGCCGAGGTCGAGGATATCTATGCCATGGTGCGC
GACGGCACGCCGATCATGATCACGCCCTAG

Upstream 100 bases:

>100_bases
GGGCATCGCATCAGGATTTCGTGAAGGCCCGCCTCATTGCCCGGCAGGCGTCGGACGGGCAGAATGGCGCAAAACACACC
GTATCGAGGGGCGCGGATCA

Downstream 100 bases:

>100_bases
TCGTTCAGTCCCGGTCGGTGAGCCGGTGCCACGCTGGCCGAGGGGCCGCATCGCCAGGACCGCATGATGCTGCTGGTCGA
TATCGGCACCAATGCCGGGA

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MMGWLGRIVALAVLLGLAACGPSKFKTYSGPPVTQVVVNKGARQMLLLNGNTVLKAYRIGLGNEPLGHKQFEGDGKTPEG
LYYIDRRNPDSRYHLSIGISYPNPHDAVLASELGRSAGSDIFIHGQGPEGRALSRLRQDWTAGCIAVTDAEVEDIYAMVR
DGTPIMITP

Sequences:

>Translated_169_residues
MMGWLGRIVALAVLLGLAACGPSKFKTYSGPPVTQVVVNKGARQMLLLNGNTVLKAYRIGLGNEPLGHKQFEGDGKTPEG
LYYIDRRNPDSRYHLSIGISYPNPHDAVLASELGRSAGSDIFIHGQGPEGRALSRLRQDWTAGCIAVTDAEVEDIYAMVR
DGTPIMITP
>Mature_169_residues
MMGWLGRIVALAVLLGLAACGPSKFKTYSGPPVTQVVVNKGARQMLLLNGNTVLKAYRIGLGNEPLGHKQFEGDGKTPEG
LYYIDRRNPDSRYHLSIGISYPNPHDAVLASELGRSAGSDIFIHGQGPEGRALSRLRQDWTAGCIAVTDAEVEDIYAMVR
DGTPIMITP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18250; Mature: 18250

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGWLGRIVALAVLLGLAACGPSKFKTYSGPPVTQVVVNKGARQMLLLNGNTVLKAYRIG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCEEEEEECCCEEEEEEEEC
LGNEPLGHKQFEGDGKTPEGLYYIDRRNPDSRYHLSIGISYPNPHDAVLASELGRSAGSD
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCE
IFIHGQGPEGRALSRLRQDWTAGCIAVTDAEVEDIYAMVRDGTPIMITP
EEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MMGWLGRIVALAVLLGLAACGPSKFKTYSGPPVTQVVVNKGARQMLLLNGNTVLKAYRIG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCEEEEEECCCEEEEEEEEC
LGNEPLGHKQFEGDGKTPEGLYYIDRRNPDSRYHLSIGISYPNPHDAVLASELGRSAGSD
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCE
IFIHGQGPEGRALSRLRQDWTAGCIAVTDAEVEDIYAMVRDGTPIMITP
EEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA