Click here to switch to the map view.

The map label for this gene is 119386741

Identifier: 119386741

GI number: 119386741

Start: 1183422

End: 1183952

Strand: Direct

Name: 119386741

Synonym: Pden_4034

Alternate gene names: NA

Gene position: 1183422-1183952 (Clockwise)

Preceding gene: 119386740

Following gene: 119386742

Centisome position: 68.4

GC content: 68.17

Gene sequence:

>531_bases
ATGATTGAGCCCGCCGGCCGCCAGCGGATCGTGGGACAGGCGCTGTTCGTGGCGCTGTTCCTGGCGATCCTGTTCTGGCG
GCTTCTGCCGCTGGCGCCGGGCCGCATCGGCTGGCCGGGACCGGACCTGGCGTTGTGCCTGGTGCTGGTCTGGGTGCTGC
GCCGCCCCGAACAGGTGCCGGTCCTGACCATCGCCGCGCTGTTCCTGATCGAGGACATCCTGCTGATGCGGCCCATCGGC
CTGGGCGCCGCGCTGGCCGTGATCGGCACCGAGGCCGCAAGAAAGCGCGAGCAGCGTTGGCGTGAACTGCCTTTCATGGT
TGAATGGCTGCGGGTGGCGATGCTTCTGGCGTTGATGATGGTGGCGAACCGCGTCCTGCTGGCGATCTTTTTCCTGCCCC
TGCCGCCGCTTGGGCAGGTAATCCTGCAATTCATCGCGACGGTTGCCGCCTATCCGCTGGTCGCGGGACTTGCCGGCTGG
GCGCTTGGCCTGCCGCGGGGCCGCGTCGAACGAGACACGAGGCATCGCTGA

Upstream 100 bases:

>100_bases
ACCGGGCTGCTGATCCCGCCCCCGGCGACCGAGTTCATCGGCCCGCCCATGCCGCCGCTGGCCGATCCGCAGGACGCCGA
GGCCGGGAACGGGGACGCAG

Downstream 100 bases:

>100_bases
GCCATGCGCAAGTCGGAACGCGAAATCGTCGAAAGCGGCCGCCTGATCACCCGCCGGGTGCTGATGCTGGGCGCGATCCA
GGCGGCGGTCGTCTCGGCGC

Product: putative rod shape-determining protein MreD

Products: NA

Alternate protein names: Rod Shape-Determining Protein MreD

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MIEPAGRQRIVGQALFVALFLAILFWRLLPLAPGRIGWPGPDLALCLVLVWVLRRPEQVPVLTIAALFLIEDILLMRPIG
LGAALAVIGTEAARKREQRWRELPFMVEWLRVAMLLALMMVANRVLLAIFFLPLPPLGQVILQFIATVAAYPLVAGLAGW
ALGLPRGRVERDTRHR

Sequences:

>Translated_176_residues
MIEPAGRQRIVGQALFVALFLAILFWRLLPLAPGRIGWPGPDLALCLVLVWVLRRPEQVPVLTIAALFLIEDILLMRPIG
LGAALAVIGTEAARKREQRWRELPFMVEWLRVAMLLALMMVANRVLLAIFFLPLPPLGQVILQFIATVAAYPLVAGLAGW
ALGLPRGRVERDTRHR
>Mature_176_residues
MIEPAGRQRIVGQALFVALFLAILFWRLLPLAPGRIGWPGPDLALCLVLVWVLRRPEQVPVLTIAALFLIEDILLMRPIG
LGAALAVIGTEAARKREQRWRELPFMVEWLRVAMLLALMMVANRVLLAIFFLPLPPLGQVILQFIATVAAYPLVAGLAGW
ALGLPRGRVERDTRHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19636; Mature: 19636

Theoretical pI: Translated: 11.97; Mature: 11.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEPAGRQRIVGQALFVALFLAILFWRLLPLAPGRIGWPGPDLALCLVLVWVLRRPEQVP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH
VLTIAALFLIEDILLMRPIGLGAALAVIGTEAARKREQRWRELPFMVEWLRVAMLLALMM
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VANRVLLAIFFLPLPPLGQVILQFIATVAAYPLVAGLAGWALGLPRGRVERDTRHR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIEPAGRQRIVGQALFVALFLAILFWRLLPLAPGRIGWPGPDLALCLVLVWVLRRPEQVP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH
VLTIAALFLIEDILLMRPIGLGAALAVIGTEAARKREQRWRELPFMVEWLRVAMLLALMM
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VANRVLLAIFFLPLPPLGQVILQFIATVAAYPLVAGLAGWALGLPRGRVERDTRHR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA