| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is mreC [H]
Identifier: 119386740
GI number: 119386740
Start: 1182497
End: 1183429
Strand: Direct
Name: mreC [H]
Synonym: Pden_4033
Alternate gene names: 119386740
Gene position: 1182497-1183429 (Clockwise)
Preceding gene: 119386739
Following gene: 119386741
Centisome position: 68.35
GC content: 69.24
Gene sequence:
>933_bases ATGGCGCGCAAGGGCCCAGATTACGCGGCTCCGGTCCGCCGCATCCTGGTTTCGCTGCTGGTGCTGGTGCTGCTGGCGGT GTTCCTGTTCTGGCAGATCGACAGCCCCAGGGCCGAACGGATGCGCGCGGCCTTCATCGACCGCTTCGTGCCCAGCTTCG ACTGGGTGATGGCGCCGGTGACCAAGGTCTCGCGCATGGTGGCGGGGTTCCAGTCCTATGCCCGGCTCTACGAGCAGAAT CAGGAATTGCGCCGCGAGTTGCAGAAGATGTCGGCCTGGAAAGAGGCCGCGGTTCAGCTCGAGCAGGAAAACGCCAAGCT GCTGGCGCAGAACAATGTGAGGATCGACCCGGCGCTGACCTCGGTCTCGGGCGTGGTGCTGACCGACAGCGGCACGGCCT TCCGGCAATCGGTGCTGCTGAACGTGGGCGCGCGCGACGGCATCGTCGACGGCTGGGCGACCATGGACGGGCTGGGGCTG GTCGGGCGCATCTCGGGCGTGGGGCAGACCACCAGCCGGGTGATGCTGCTGACCGATCCCTCCAGTCGCATCCCGGTGAC CATCCTGCCCTCGGGGCAACATGCGCTGCTGACCGGGGACAACACCACCCTGCCGGCGCTGGATTTCATCGAAAGCCCGG AAAACCTGCGTCCCGGCGACCGGGTGGTCAGCTCGGGCGACGGAGGCGTGTTCCCGCCGGGCCTGCCGGTGGGCCAGGTG GCGCTGGCCAGCGACGGCCGGCTGCGGGTGCGGCTGGCCGCCGATTACGGCCGGCTGGAATTCCTGCGCGTGCTGCGCAG CCATCCGGCCGAGCAACTGGCCGATACCGGGCTGCTGATCCCGCCCCCGGCGACCGAGTTCATCGGCCCGCCCATGCCGC CGCTGGCCGATCCGCAGGACGCCGAGGCCGGGAACGGGGACGCAGATGATTGA
Upstream 100 bases:
>100_bases CAGCCGATGAGCTGCGTGGCGCTTGGCACCGGCAAGGCGCTGGAGTTCGAAAAGCAGCTGCGCCACGTGATCGACTACGA CAGCTGAGCGGGTTCGGCCC
Downstream 100 bases:
>100_bases GCCCGCCGGCCGCCAGCGGATCGTGGGACAGGCGCTGTTCGTGGCGCTGTTCCTGGCGATCCTGTTCTGGCGGCTTCTGC CGCTGGCGCCGGGCCGCATC
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MARKGPDYAAPVRRILVSLLVLVLLAVFLFWQIDSPRAERMRAAFIDRFVPSFDWVMAPVTKVSRMVAGFQSYARLYEQN QELRRELQKMSAWKEAAVQLEQENAKLLAQNNVRIDPALTSVSGVVLTDSGTAFRQSVLLNVGARDGIVDGWATMDGLGL VGRISGVGQTTSRVMLLTDPSSRIPVTILPSGQHALLTGDNTTLPALDFIESPENLRPGDRVVSSGDGGVFPPGLPVGQV ALASDGRLRVRLAADYGRLEFLRVLRSHPAEQLADTGLLIPPPATEFIGPPMPPLADPQDAEAGNGDADD
Sequences:
>Translated_310_residues MARKGPDYAAPVRRILVSLLVLVLLAVFLFWQIDSPRAERMRAAFIDRFVPSFDWVMAPVTKVSRMVAGFQSYARLYEQN QELRRELQKMSAWKEAAVQLEQENAKLLAQNNVRIDPALTSVSGVVLTDSGTAFRQSVLLNVGARDGIVDGWATMDGLGL VGRISGVGQTTSRVMLLTDPSSRIPVTILPSGQHALLTGDNTTLPALDFIESPENLRPGDRVVSSGDGGVFPPGLPVGQV ALASDGRLRVRLAADYGRLEFLRVLRSHPAEQLADTGLLIPPPATEFIGPPMPPLADPQDAEAGNGDADD >Mature_309_residues ARKGPDYAAPVRRILVSLLVLVLLAVFLFWQIDSPRAERMRAAFIDRFVPSFDWVMAPVTKVSRMVAGFQSYARLYEQNQ ELRRELQKMSAWKEAAVQLEQENAKLLAQNNVRIDPALTSVSGVVLTDSGTAFRQSVLLNVGARDGIVDGWATMDGLGLV GRISGVGQTTSRVMLLTDPSSRIPVTILPSGQHALLTGDNTTLPALDFIESPENLRPGDRVVSSGDGGVFPPGLPVGQVA LASDGRLRVRLAADYGRLEFLRVLRSHPAEQLADTGLLIPPPATEFIGPPMPPLADPQDAEAGNGDADD
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 33487; Mature: 33356
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKGPDYAAPVRRILVSLLVLVLLAVFLFWQIDSPRAERMRAAFIDRFVPSFDWVMAPV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHH TKVSRMVAGFQSYARLYEQNQELRRELQKMSAWKEAAVQLEQENAKLLAQNNVRIDPALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECHHHH SVSGVVLTDSGTAFRQSVLLNVGARDGIVDGWATMDGLGLVGRISGVGQTTSRVMLLTDP CCCEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCCEEEEEECC SSRIPVTILPSGQHALLTGDNTTLPALDFIESPENLRPGDRVVSSGDGGVFPPGLPVGQV CCCCCEEEECCCCEEEEECCCCCCCHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCE ALASDGRLRVRLAADYGRLEFLRVLRSHPAEQLADTGLLIPPPATEFIGPPMPPLADPQD EEECCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCC AEAGNGDADD CCCCCCCCCC >Mature Secondary Structure ARKGPDYAAPVRRILVSLLVLVLLAVFLFWQIDSPRAERMRAAFIDRFVPSFDWVMAPV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHH TKVSRMVAGFQSYARLYEQNQELRRELQKMSAWKEAAVQLEQENAKLLAQNNVRIDPALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECHHHH SVSGVVLTDSGTAFRQSVLLNVGARDGIVDGWATMDGLGLVGRISGVGQTTSRVMLLTDP CCCEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCCEEEEEECC SSRIPVTILPSGQHALLTGDNTTLPALDFIESPENLRPGDRVVSSGDGGVFPPGLPVGQV CCCCCEEEECCCCEEEEECCCCCCCHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCE ALASDGRLRVRLAADYGRLEFLRVLRSHPAEQLADTGLLIPPPATEFIGPPMPPLADPQD EEECCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCC AEAGNGDADD CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]