Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386630

Identifier: 119386630

GI number: 119386630

Start: 1058292

End: 1060046

Strand: Direct

Name: 119386630

Synonym: Pden_3923

Alternate gene names: NA

Gene position: 1058292-1060046 (Clockwise)

Preceding gene: 119386629

Following gene: 119386631

Centisome position: 61.17

GC content: 71.0

Gene sequence:

>1755_bases
ATGACCGCATCCGCCTGCCTGGCCCCAGAAGGCCCGGCGCGTGTCCTGCAAGGAGCCGACGGCATGGAAGACTTCGTTCC
CAGACTGGATCCCGGACTGGACGCGGCGCGGCAGGTCCGCGCCGGGCAGGCCCTGGAAACCGAAGCACCGCTGGACCCTG
CCGAGGCGGTAATCGGCGACACGGCGGATGGCACCGGCCGGGGCCGCCGCATCTATGGCGCATGCAGCGTCGAGACCTAT
CGTGCCGCCGGGGCGCTGCATGCCGCCCATCGCGATGCCGGCGGTTTTCTGGATGCGGTGGATCGTTTCGCCACGCCGGA
TTTCTGGCGCCGGGACGGGGCGGTGAAATCCTGGATCTATGACCGGCAGGCGGTGGAGCATGCGCCGGGCCGGGACATGG
ATTCGGTGCGGGTGTTCTATCATGCCGGGCATGGCCGGATGGACGAGGACGGGATCTTCCACCTGCCGATGGGGGCGCTG
TGGACCGGGGCGGATGCCTGCCTGACCTCCGACCGGATGCGGCTTGGCTCGGGTGCGCTGCGCTACCTGTTCTGGTCCAC
CAGCCAGTCGCTGCGGATCGGGCCCGGCTACAGCCCGCTGCACAGTTGGGTGCGGGCCAACCAGGGCTTGCGCATGCTGT
TCGGCTTCGACTCGATCTGCTGGGATTCCGGCCGCTATGGCGCGAATTTCTGGCACCATTGGCAGATGGGCAAGCCCTTC
GCGCAGGCATGGCTGGACGGGGCCTGGGACATCGCACCCGATCAGAGCCCGGTCGCCTGCGCCTGCGCGCCGGATCGCGA
CGTGGCGCTGGCCATGCTTTTTGGCGAACGGCAATTCCGGGCGCAGCGCGGTGCGGCGCAATATTGGGCCTGGCGCTGGC
ACGCGCCCGTGGCGCTTTACAGGCGCGAGGCGGCGCTGACCGAGCCGCCGGCCGAGTTCGCGGCGGTGCGGCTGGTCCCG
GCGGCCGAGGATCGCGCGCTGGCCAGGGCGGTGCTGTCGCGCCTGGGACTGGACCCGGCCTTGGTTGCGGCCGATGCGCA
GGGCGCGATCTCGGTCAGCCACGGCCCCGTCCGCTTCCAACGCCGGCCCGACGGGCGCATCCTGCTGGAGTTCGAGCCCG
GTGCGCCGGGGCGGGGCCTGCGCGAGATGCCGCCGCGCCGCACGCTTGTCAGCCGGGCCCAGAATGCGTTGCGCAGCCAT
GGCTTCCTGCTGCCGGGGACCGAGTTGGTCTTCGACCGCGTCTCGCTGGCCATGTCCGCGACGGCCAGCCTGCGCCGGCT
GGACGAGCCTCCTGCGGAAAGCCTGGACGAAATCATCGTGCAATTCCGCCAGTCCATCGACGGTATCCCGGTGCTGACCC
CGGATGCCGGCAGCCTGCGGCTGGCGATGCGGCCGGACGGCAGCGTGCTGCGCATCGAATCGACCCTGCGCCGGGTGGCT
GAGCGCATGCCGGCCCGCGCCCATCCCCATGGCATGCCCGACGATCCGCCGGCACCCCTGCGGCCCGAGGGCCCGCCCAC
GCCCGAGCCGCAGACGATCGCCCGCATCCTGGCGCAGCATTCGGCGCGGCTGATGCGCGATCTGGCGGCGCGCGGGGCGG
CGCCGCTCAGCCTGCGCATCCTGCCGGGCACGACGGAAATCGGATACGGAATCCGCAGCAACACGGCGCGTCTCGTCGCC
CGCCAGGGCATCGAGATCGAATGCGTGCGCGGCTTTCGCAAGCGTTACTGGATCCAGTCTGACCTGGGTGACTGA

Upstream 100 bases:

>100_bases
CGGCTATTCAGGGGAGATTGCCGGGATTCGCGGGTGATTTGTATATTAACCGCAGATTCACGTTCAGTTCACGCGGCCCA
TCCTAGCTTCGGTGCAGCAT

Downstream 100 bases:

>100_bases
CGATCCGGTAGCCCGGGGGCGGAGGCAGCCGCCTCCGGGCACTTGACTGGCGGCAAGGCCATGGGGAGGAATTCCCGAGA
GGGGGAGCATGGCGAAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MTASACLAPEGPARVLQGADGMEDFVPRLDPGLDAARQVRAGQALETEAPLDPAEAVIGDTADGTGRGRRIYGACSVETY
RAAGALHAAHRDAGGFLDAVDRFATPDFWRRDGAVKSWIYDRQAVEHAPGRDMDSVRVFYHAGHGRMDEDGIFHLPMGAL
WTGADACLTSDRMRLGSGALRYLFWSTSQSLRIGPGYSPLHSWVRANQGLRMLFGFDSICWDSGRYGANFWHHWQMGKPF
AQAWLDGAWDIAPDQSPVACACAPDRDVALAMLFGERQFRAQRGAAQYWAWRWHAPVALYRREAALTEPPAEFAAVRLVP
AAEDRALARAVLSRLGLDPALVAADAQGAISVSHGPVRFQRRPDGRILLEFEPGAPGRGLREMPPRRTLVSRAQNALRSH
GFLLPGTELVFDRVSLAMSATASLRRLDEPPAESLDEIIVQFRQSIDGIPVLTPDAGSLRLAMRPDGSVLRIESTLRRVA
ERMPARAHPHGMPDDPPAPLRPEGPPTPEPQTIARILAQHSARLMRDLAARGAAPLSLRILPGTTEIGYGIRSNTARLVA
RQGIEIECVRGFRKRYWIQSDLGD

Sequences:

>Translated_584_residues
MTASACLAPEGPARVLQGADGMEDFVPRLDPGLDAARQVRAGQALETEAPLDPAEAVIGDTADGTGRGRRIYGACSVETY
RAAGALHAAHRDAGGFLDAVDRFATPDFWRRDGAVKSWIYDRQAVEHAPGRDMDSVRVFYHAGHGRMDEDGIFHLPMGAL
WTGADACLTSDRMRLGSGALRYLFWSTSQSLRIGPGYSPLHSWVRANQGLRMLFGFDSICWDSGRYGANFWHHWQMGKPF
AQAWLDGAWDIAPDQSPVACACAPDRDVALAMLFGERQFRAQRGAAQYWAWRWHAPVALYRREAALTEPPAEFAAVRLVP
AAEDRALARAVLSRLGLDPALVAADAQGAISVSHGPVRFQRRPDGRILLEFEPGAPGRGLREMPPRRTLVSRAQNALRSH
GFLLPGTELVFDRVSLAMSATASLRRLDEPPAESLDEIIVQFRQSIDGIPVLTPDAGSLRLAMRPDGSVLRIESTLRRVA
ERMPARAHPHGMPDDPPAPLRPEGPPTPEPQTIARILAQHSARLMRDLAARGAAPLSLRILPGTTEIGYGIRSNTARLVA
RQGIEIECVRGFRKRYWIQSDLGD
>Mature_583_residues
TASACLAPEGPARVLQGADGMEDFVPRLDPGLDAARQVRAGQALETEAPLDPAEAVIGDTADGTGRGRRIYGACSVETYR
AAGALHAAHRDAGGFLDAVDRFATPDFWRRDGAVKSWIYDRQAVEHAPGRDMDSVRVFYHAGHGRMDEDGIFHLPMGALW
TGADACLTSDRMRLGSGALRYLFWSTSQSLRIGPGYSPLHSWVRANQGLRMLFGFDSICWDSGRYGANFWHHWQMGKPFA
QAWLDGAWDIAPDQSPVACACAPDRDVALAMLFGERQFRAQRGAAQYWAWRWHAPVALYRREAALTEPPAEFAAVRLVPA
AEDRALARAVLSRLGLDPALVAADAQGAISVSHGPVRFQRRPDGRILLEFEPGAPGRGLREMPPRRTLVSRAQNALRSHG
FLLPGTELVFDRVSLAMSATASLRRLDEPPAESLDEIIVQFRQSIDGIPVLTPDAGSLRLAMRPDGSVLRIESTLRRVAE
RMPARAHPHGMPDDPPAPLRPEGPPTPEPQTIARILAQHSARLMRDLAARGAAPLSLRILPGTTEIGYGIRSNTARLVAR
QGIEIECVRGFRKRYWIQSDLGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63986; Mature: 63855

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASACLAPEGPARVLQGADGMEDFVPRLDPGLDAARQVRAGQALETEAPLDPAEAVIGD
CCCCCCCCCCCHHHHHCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCC
TADGTGRGRRIYGACSVETYRAAGALHAAHRDAGGFLDAVDRFATPDFWRRDGAVKSWIY
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCHHHHHH
DRQAVEHAPGRDMDSVRVFYHAGHGRMDEDGIFHLPMGALWTGADACLTSDRMRLGSGAL
HHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCHHHCCCHHHHHHHHHHHCCCCE
RYLFWSTSQSLRIGPGYSPLHSWVRANQGLRMLFGFDSICWDSGRYGANFWHHWQMGKPF
EEEEECCCCCEEECCCCHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCEEECCCCCHH
AQAWLDGAWDIAPDQSPVACACAPDRDVALAMLFGERQFRAQRGAAQYWAWRWHAPVALY
HHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHCCCHHHEEEEECCCHHHH
RREAALTEPPAEFAAVRLVPAAEDRALARAVLSRLGLDPALVAADAQGAISVSHGPVRFQ
HHHHHCCCCCHHHEEEEEECCCHHHHHHHHHHHHHCCCHHEEEECCCCCEEECCCCEEEE
RRPDGRILLEFEPGAPGRGLREMPPRRTLVSRAQNALRSHGFLLPGTELVFDRVSLAMSA
ECCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
TASLRRLDEPPAESLDEIIVQFRQSIDGIPVLTPDAGSLRLAMRPDGSVLRIESTLRRVA
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCEEEHHHHHHHHH
ERMPARAHPHGMPDDPPAPLRPEGPPTPEPQTIARILAQHSARLMRDLAARGAAPLSLRI
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LPGTTEIGYGIRSNTARLVARQGIEIECVRGFRKRYWIQSDLGD
ECCCCHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TASACLAPEGPARVLQGADGMEDFVPRLDPGLDAARQVRAGQALETEAPLDPAEAVIGD
CCCCCCCCCCHHHHHCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCC
TADGTGRGRRIYGACSVETYRAAGALHAAHRDAGGFLDAVDRFATPDFWRRDGAVKSWIY
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCHHHHHH
DRQAVEHAPGRDMDSVRVFYHAGHGRMDEDGIFHLPMGALWTGADACLTSDRMRLGSGAL
HHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCHHHCCCHHHHHHHHHHHCCCCE
RYLFWSTSQSLRIGPGYSPLHSWVRANQGLRMLFGFDSICWDSGRYGANFWHHWQMGKPF
EEEEECCCCCEEECCCCHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCEEECCCCCHH
AQAWLDGAWDIAPDQSPVACACAPDRDVALAMLFGERQFRAQRGAAQYWAWRWHAPVALY
HHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHCCCHHHEEEEECCCHHHH
RREAALTEPPAEFAAVRLVPAAEDRALARAVLSRLGLDPALVAADAQGAISVSHGPVRFQ
HHHHHCCCCCHHHEEEEEECCCHHHHHHHHHHHHHCCCHHEEEECCCCCEEECCCCEEEE
RRPDGRILLEFEPGAPGRGLREMPPRRTLVSRAQNALRSHGFLLPGTELVFDRVSLAMSA
ECCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
TASLRRLDEPPAESLDEIIVQFRQSIDGIPVLTPDAGSLRLAMRPDGSVLRIESTLRRVA
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCEEEHHHHHHHHH
ERMPARAHPHGMPDDPPAPLRPEGPPTPEPQTIARILAQHSARLMRDLAARGAAPLSLRI
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LPGTTEIGYGIRSNTARLVARQGIEIECVRGFRKRYWIQSDLGD
ECCCCHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA