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The map label for this gene is 119386631

Identifier: 119386631

GI number: 119386631

Start: 1060135

End: 1060851

Strand: Direct

Name: 119386631

Synonym: Pden_3924

Alternate gene names: NA

Gene position: 1060135-1060851 (Clockwise)

Preceding gene: 119386630

Following gene: 119386633

Centisome position: 61.28

GC content: 71.83

Gene sequence:

>717_bases
ATGGCGAAATACACCCGCGCCGAAATCGTCCGGCGCATCGCGACGATGGGACGCCTGCACCTGGCCGGGTCCGACCTGGC
CGGGCTGGATCTGTCCGGCATGACGCTGGTGGGGGCCGATCTGTCCTATGCCGACCTGACCGAGACCGACCTGACCGATG
CGCAGCTTTCAGATGCCAGCCTCTGGTCGGCATGCGCGGCGCGGGCGCGGTTTCGCAACGCCAACCTGTCGCGGGCGAGC
CTTGGGCTGGCCGACCTGTCGGATGCCGACCTGCGGGGCGCGGTGCTGGAGCGTGCCGACCTGACCGGCGCCCGGCTGGA
CCGTGCCGACCTGACGGCGGCGCTGCTGCGCGGGGCCTGGCTCGACAGCATGCAGCGGGCGATGGCGACCGGGGCACCGC
CGCTACGTTATCCGGCACGGCACCGGCCCACCACCTGCATCCTGCACGAAGAACATGTCTCCGAACCCGTGGCCCTGCGC
TGCGGCGACCGGCTGGAGATGCACCTGAACAGCCTGTCCGAAGCGGTCCCGCATCCGTCCGGGTTGGCCCGGCTCGTAGG
CGCGCCGATCCTTTCCGGCCCCGAACGGCCGGCACAGGTCGCGGGTCCACCCTGCGTGCTGGTCTTTTGCGCCATCGCCC
CGGGCCGTGCGCGGCTGGTGCTGGAGCCGGGCGAGGGCAGGGCGCCCGTCGTGCTGGAGGTGCTGGTTTCGCCGTGA

Upstream 100 bases:

>100_bases
CTGGGTGACTGACGATCCGGTAGCCCGGGGGCGGAGGCAGCCGCCTCCGGGCACTTGACTGGCGGCAAGGCCATGGGGAG
GAATTCCCGAGAGGGGGAGC

Downstream 100 bases:

>100_bases
CGGCCGCCGGGCTTACAGCCCCGAGCGCGTGATCCCCATCAACCTGGCCATGCGCAGTGGCGCAACCGGATAATCCGGGT
CGGCCATCAGCTCCAGCGAG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MAKYTRAEIVRRIATMGRLHLAGSDLAGLDLSGMTLVGADLSYADLTETDLTDAQLSDASLWSACAARARFRNANLSRAS
LGLADLSDADLRGAVLERADLTGARLDRADLTAALLRGAWLDSMQRAMATGAPPLRYPARHRPTTCILHEEHVSEPVALR
CGDRLEMHLNSLSEAVPHPSGLARLVGAPILSGPERPAQVAGPPCVLVFCAIAPGRARLVLEPGEGRAPVVLEVLVSP

Sequences:

>Translated_238_residues
MAKYTRAEIVRRIATMGRLHLAGSDLAGLDLSGMTLVGADLSYADLTETDLTDAQLSDASLWSACAARARFRNANLSRAS
LGLADLSDADLRGAVLERADLTGARLDRADLTAALLRGAWLDSMQRAMATGAPPLRYPARHRPTTCILHEEHVSEPVALR
CGDRLEMHLNSLSEAVPHPSGLARLVGAPILSGPERPAQVAGPPCVLVFCAIAPGRARLVLEPGEGRAPVVLEVLVSP
>Mature_237_residues
AKYTRAEIVRRIATMGRLHLAGSDLAGLDLSGMTLVGADLSYADLTETDLTDAQLSDASLWSACAARARFRNANLSRASL
GLADLSDADLRGAVLERADLTGARLDRADLTAALLRGAWLDSMQRAMATGAPPLRYPARHRPTTCILHEEHVSEPVALRC
GDRLEMHLNSLSEAVPHPSGLARLVGAPILSGPERPAQVAGPPCVLVFCAIAPGRARLVLEPGEGRAPVVLEVLVSP

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 25206; Mature: 25075

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYTRAEIVRRIATMGRLHLAGSDLAGLDLSGMTLVGADLSYADLTETDLTDAQLSDAS
CCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCHHCCCCCCCCCCCCCHHH
LWSACAARARFRNANLSRASLGLADLSDADLRGAVLERADLTGARLDRADLTAALLRGAW
HHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LDSMQRAMATGAPPLRYPARHRPTTCILHEEHVSEPVALRCGDRLEMHLNSLSEAVPHPS
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHCCCCEEEECCCHHHHHHHHHHHHCCCCH
GLARLVGAPILSGPERPAQVAGPPCVLVFCAIAPGRARLVLEPGEGRAPVVLEVLVSP
HHHHHHCCCCCCCCCCCCHHCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure 
AKYTRAEIVRRIATMGRLHLAGSDLAGLDLSGMTLVGADLSYADLTETDLTDAQLSDAS
CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCHHCCCCCCCCCCCCCHHH
LWSACAARARFRNANLSRASLGLADLSDADLRGAVLERADLTGARLDRADLTAALLRGAW
HHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LDSMQRAMATGAPPLRYPARHRPTTCILHEEHVSEPVALRCGDRLEMHLNSLSEAVPHPS
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHCCCCEEEECCCHHHHHHHHHHHHCCCCH
GLARLVGAPILSGPERPAQVAGPPCVLVFCAIAPGRARLVLEPGEGRAPVVLEVLVSP
HHHHHHCCCCCCCCCCCCHHCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA