| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
Click here to switch to the map view.
The map label for this gene is 119386619
Identifier: 119386619
GI number: 119386619
Start: 1046946
End: 1047236
Strand: Direct
Name: 119386619
Synonym: Pden_3912
Alternate gene names: NA
Gene position: 1046946-1047236 (Clockwise)
Preceding gene: 119386616
Following gene: 119386629
Centisome position: 60.51
GC content: 67.35
Gene sequence:
>291_bases ATGGCACCTTTTCGCATGATTCTGACGGCCGCGACCTTCTCGACGGCAATCCTTCCGGGTGCGGCCCTGGCCGATGACGA CGATTTCCCCCGTTATTTCCATCGCGGCGGGATCGAGCGGCTGCTGCTGCCTGGCCTGGACGGCTGGACCTATCGCGGCT GGCGCGGGGATGACGACGACCGCCGGTCCGTCCGCTATCGCTCCTGGGGCGACGATGACGACGACCGCCCCCGGCGCCGC CGCCGTCGTGGTCGCGACGATGATGACGACGACGACGATGACGACGATTGA
Upstream 100 bases:
>100_bases GGAGTTCCCGAAAATCGCAAATCGGCGGGAATAAACCGCGCGGCGTTCCGTAACCCCCTTGCAACCTTCTGGCGTTGCCT TGGATCAAAGGATGAAGCGC
Downstream 100 bases:
>100_bases CGGATTCAGCGATTAGGCAGGCGAGACCGGCCCCTGAACCGGGCCGGCTTCACCGGTGGGATTGCCGACCGGATGCGCAA GGGACGGATCGGGACGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MAPFRMILTAATFSTAILPGAALADDDDFPRYFHRGGIERLLLPGLDGWTYRGWRGDDDDRRSVRYRSWGDDDDDRPRRR RRRGRDDDDDDDDDDD
Sequences:
>Translated_96_residues MAPFRMILTAATFSTAILPGAALADDDDFPRYFHRGGIERLLLPGLDGWTYRGWRGDDDDRRSVRYRSWGDDDDDRPRRR RRRGRDDDDDDDDDDD >Mature_95_residues APFRMILTAATFSTAILPGAALADDDDFPRYFHRGGIERLLLPGLDGWTYRGWRGDDDDRRSVRYRSWGDDDDDRPRRRR RRGRDDDDDDDDDDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11265; Mature: 11134
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPFRMILTAATFSTAILPGAALADDDDFPRYFHRGGIERLLLPGLDGWTYRGWRGDDDD CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCC RRSVRYRSWGDDDDDRPRRRRRRGRDDDDDDDDDDD CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure APFRMILTAATFSTAILPGAALADDDDFPRYFHRGGIERLLLPGLDGWTYRGWRGDDDD CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCC RRSVRYRSWGDDDDDRPRRRRRRGRDDDDDDDDDDD CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA