| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is yaiN [C]
Identifier: 119386066
GI number: 119386066
Start: 508181
End: 508453
Strand: Direct
Name: yaiN [C]
Synonym: Pden_3352
Alternate gene names: 119386066
Gene position: 508181-508453 (Clockwise)
Preceding gene: 119386064
Following gene: 119386067
Centisome position: 29.37
GC content: 66.3
Gene sequence:
>273_bases ATGTCCCACACCATCCGCGACAAGCAGAAGCTGATCGCCCGGGTCCGCCGCCTCAGGGGCCAGATCGAGGGGATCGAACG CGCGCTGGAAGCCGAAAAACCCTGCGGCGAGATCCTGCGCCAGCTGGCCTCGGCCCGCGGCGCGATGAGCGGGCTGACGG CGGAGGTGATGGAGGATCACCTCCGCGAGCATGTGCTGCAGGCCGAAACCGATGCCGAGCGCCGGCAGGGCGGCGAGGAA CTGATCGAAATCATCCGCACCTACATGAAATAG
Upstream 100 bases:
>100_bases GCAGCGTCCATGCCATCCGCCCTAAACCATTCCCCGGCTTCACGGATCCTGCCTCTTATAGTATAGTCCCCCATGCCATA TGAAGCCGAGGACCGCCGCC
Downstream 100 bases:
>100_bases CCCTGGAGGGGGCCCATGTCCGCAATCGACATCTCCGCCCATACCCACGGGCACGACTTTCTCGGGCGGCACCACCGGCG CAACGAACGCCGGGTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSHTIRDKQKLIARVRRLRGQIEGIERALEAEKPCGEILRQLASARGAMSGLTAEVMEDHLREHVLQAETDAERRQGGEE LIEIIRTYMK
Sequences:
>Translated_90_residues MSHTIRDKQKLIARVRRLRGQIEGIERALEAEKPCGEILRQLASARGAMSGLTAEVMEDHLREHVLQAETDAERRQGGEE LIEIIRTYMK >Mature_89_residues SHTIRDKQKLIARVRRLRGQIEGIERALEAEKPCGEILRQLASARGAMSGLTAEVMEDHLREHVLQAETDAERRQGGEEL IEIIRTYMK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=91, Percent_Identity=43.956043956044, Blast_Score=79, Evalue=5e-17, Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=37.7777777777778, Blast_Score=76, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 10295; Mature: 10164
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTIRDKQKLIARVRRLRGQIEGIERALEAEKPCGEILRQLASARGAMSGLTAEVMEDH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LREHVLQAETDAERRQGGEELIEIIRTYMK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHC >Mature Secondary Structure SHTIRDKQKLIARVRRLRGQIEGIERALEAEKPCGEILRQLASARGAMSGLTAEVMEDH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LREHVLQAETDAERRQGGEELIEIIRTYMK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA