Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is yaiN [C]

Identifier: 119386066

GI number: 119386066

Start: 508181

End: 508453

Strand: Direct

Name: yaiN [C]

Synonym: Pden_3352

Alternate gene names: 119386066

Gene position: 508181-508453 (Clockwise)

Preceding gene: 119386064

Following gene: 119386067

Centisome position: 29.37

GC content: 66.3

Gene sequence:

>273_bases
ATGTCCCACACCATCCGCGACAAGCAGAAGCTGATCGCCCGGGTCCGCCGCCTCAGGGGCCAGATCGAGGGGATCGAACG
CGCGCTGGAAGCCGAAAAACCCTGCGGCGAGATCCTGCGCCAGCTGGCCTCGGCCCGCGGCGCGATGAGCGGGCTGACGG
CGGAGGTGATGGAGGATCACCTCCGCGAGCATGTGCTGCAGGCCGAAACCGATGCCGAGCGCCGGCAGGGCGGCGAGGAA
CTGATCGAAATCATCCGCACCTACATGAAATAG

Upstream 100 bases:

>100_bases
GCAGCGTCCATGCCATCCGCCCTAAACCATTCCCCGGCTTCACGGATCCTGCCTCTTATAGTATAGTCCCCCATGCCATA
TGAAGCCGAGGACCGCCGCC

Downstream 100 bases:

>100_bases
CCCTGGAGGGGGCCCATGTCCGCAATCGACATCTCCGCCCATACCCACGGGCACGACTTTCTCGGGCGGCACCACCGGCG
CAACGAACGCCGGGTCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MSHTIRDKQKLIARVRRLRGQIEGIERALEAEKPCGEILRQLASARGAMSGLTAEVMEDHLREHVLQAETDAERRQGGEE
LIEIIRTYMK

Sequences:

>Translated_90_residues
MSHTIRDKQKLIARVRRLRGQIEGIERALEAEKPCGEILRQLASARGAMSGLTAEVMEDHLREHVLQAETDAERRQGGEE
LIEIIRTYMK
>Mature_89_residues
SHTIRDKQKLIARVRRLRGQIEGIERALEAEKPCGEILRQLASARGAMSGLTAEVMEDHLREHVLQAETDAERRQGGEEL
IEIIRTYMK

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frmR/rcnR family [H]

Homologues:

Organism=Escherichia coli, GI87081725, Length=91, Percent_Identity=43.956043956044, Blast_Score=79, Evalue=5e-17,
Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=37.7777777777778, Blast_Score=76, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10295; Mature: 10164

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTIRDKQKLIARVRRLRGQIEGIERALEAEKPCGEILRQLASARGAMSGLTAEVMEDH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LREHVLQAETDAERRQGGEELIEIIRTYMK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
>Mature Secondary Structure 
SHTIRDKQKLIARVRRLRGQIEGIERALEAEKPCGEILRQLASARGAMSGLTAEVMEDH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LREHVLQAETDAERRQGGEELIEIIRTYMK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA