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The map label for this gene is 119386064

Identifier: 119386064

GI number: 119386064

Start: 506549

End: 507166

Strand: Direct

Name: 119386064

Synonym: Pden_3350

Alternate gene names: NA

Gene position: 506549-507166 (Clockwise)

Preceding gene: 119386063

Following gene: 119386066

Centisome position: 29.28

GC content: 66.34

Gene sequence:

>618_bases
GTGTTCCAGCCTCCGAACGCGGTTCGGCTGCATGTCTCCCTGGCCGAGATCGAGCCGGAGATCTGGCGGCGGCTGGTGGT
TCCCTGCGACTGGACGCTGGACCGGCTGCATCCGGTCCTGCAGGCGGCCTTCGGCTGGACCGACAGCCATCTGCACGAAT
TCCGCATCAGCGGGTTGCGCTACGGCGATCCGGTGCTGCTGGCTGACGGTTTCGGCGGCCCCCGCGTTTTCGACTCTGCC
GAGGTGCGGCTACAGGATTTCGTCGGGAGCGACGTCGGTTTCACCTATGCCTACGATTTCGGGGACGGTTGGGAGCACCT
GATCCGGATCGAGGATTGGCTGGCGCTCGATCCGGCGCCGCGCCACGCGCTCTGTCTGGAAGGCGCACGGGCGAGACCGC
CCGAGGATGTCGGCGGGCCGTGGGGCTATGCGGATTTCCTCGGGATCATCCGCGACCCGACGCACGAAGAGCACCGCTCC
ACGCTGCGCTGGGCGGGCGGGCATTTCGATCCGGAATGGTTCGATCTTGATCTGATCAACAAGGATCTGCGCAATGCCTT
GCGCGCGAACGCGCGACGCCGGCTGCATCAGCCGAAGCCGAAGGCGCCGAAGGGTTAA

Upstream 100 bases:

>100_bases
CACCTGGAGCAGTCGCGGCCGCGAGCCTGGCTGGATTGCCGAGGCACTGGAGGCCGGCAAATCCCTCGAAGACTTCGCCA
TCTGACCGGGGAGGGCAGGG

Downstream 100 bases:

>100_bases
CCGCGTCTGTTTCGCTGCCTCAGCGATTCGAGGTTGACACGGAAGGCTGGCCGGTTCTGGCGTCGGCTTGGATGGTCGAG
GAAACAGTCGTCGGACATCA

Product: plasmid pRiA4b ORF-3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFQPPNAVRLHVSLAEIEPEIWRRLVVPCDWTLDRLHPVLQAAFGWTDSHLHEFRISGLRYGDPVLLADGFGGPRVFDSA
EVRLQDFVGSDVGFTYAYDFGDGWEHLIRIEDWLALDPAPRHALCLEGARARPPEDVGGPWGYADFLGIIRDPTHEEHRS
TLRWAGGHFDPEWFDLDLINKDLRNALRANARRRLHQPKPKAPKG

Sequences:

>Translated_205_residues
MFQPPNAVRLHVSLAEIEPEIWRRLVVPCDWTLDRLHPVLQAAFGWTDSHLHEFRISGLRYGDPVLLADGFGGPRVFDSA
EVRLQDFVGSDVGFTYAYDFGDGWEHLIRIEDWLALDPAPRHALCLEGARARPPEDVGGPWGYADFLGIIRDPTHEEHRS
TLRWAGGHFDPEWFDLDLINKDLRNALRANARRRLHQPKPKAPKG
>Mature_205_residues
MFQPPNAVRLHVSLAEIEPEIWRRLVVPCDWTLDRLHPVLQAAFGWTDSHLHEFRISGLRYGDPVLLADGFGGPRVFDSA
EVRLQDFVGSDVGFTYAYDFGDGWEHLIRIEDWLALDPAPRHALCLEGARARPPEDVGGPWGYADFLGIIRDPTHEEHRS
TLRWAGGHFDPEWFDLDLINKDLRNALRANARRRLHQPKPKAPKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 23414; Mature: 23414

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQPPNAVRLHVSLAEIEPEIWRRLVVPCDWTLDRLHPVLQAAFGWTDSHLHEFRISGLR
CCCCCCEEEEEEEHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC
YGDPVLLADGFGGPRVFDSAEVRLQDFVGSDVGFTYAYDFGDGWEHLIRIEDWLALDPAP
CCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHEEECCCC
RHALCLEGARARPPEDVGGPWGYADFLGIIRDPTHEEHRSTLRWAGGHFDPEWFDLDLIN
CCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEHHHHH
KDLRNALRANARRRLHQPKPKAPKG
HHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFQPPNAVRLHVSLAEIEPEIWRRLVVPCDWTLDRLHPVLQAAFGWTDSHLHEFRISGLR
CCCCCCEEEEEEEHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC
YGDPVLLADGFGGPRVFDSAEVRLQDFVGSDVGFTYAYDFGDGWEHLIRIEDWLALDPAP
CCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHEEECCCC
RHALCLEGARARPPEDVGGPWGYADFLGIIRDPTHEEHRSTLRWAGGHFDPEWFDLDLIN
CCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEHHHHH
KDLRNALRANARRRLHQPKPKAPKG
HHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]