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The map label for this gene is hvrA [H]

Identifier: 119386063

GI number: 119386063

Start: 506216

End: 506533

Strand: Direct

Name: hvrA [H]

Synonym: Pden_3349

Alternate gene names: 119386063

Gene position: 506216-506533 (Clockwise)

Preceding gene: 119386062

Following gene: 119386064

Centisome position: 29.26

GC content: 63.21

Gene sequence:

>318_bases
ATGACTGATATCGACCTGAATGCCTTGTCGCTGGCCGAACTGAAGCAGCTGGAAAAGAACCTGGCGAAGGCCATCGCCTC
TTTCGAGGATCGCCGCAAGGCCGAGGCGGGGGCTGCGGCGGAAGCGGTGGCAAAAGAGCACGGTTTCTCGCTGGGCGAAC
TGGCGAAAATGACCCCGGCGCAAAAGCGCGCCGCCGTGGCGCCGAAATACCGTCACCCGGAAAACCCCGAGATCACCTGG
AGCAGTCGCGGCCGCGAGCCTGGCTGGATTGCCGAGGCACTGGAGGCCGGCAAATCCCTCGAAGACTTCGCCATCTGA

Upstream 100 bases:

>100_bases
GGTGAGATATCCGCGAATTGCATGCGTCACGTAATGGGGATGAGATTTGCTGTCTGGCAGCCATTGGATTAAACCGGCGC
CATAACAACAGGGAACGCTT

Downstream 100 bases:

>100_bases
CCGGGGAGGGCAGGGGTGTTCCAGCCTCCGAACGCGGTTCGGCTGCATGTCTCCCTGGCCGAGATCGAGCCGGAGATCTG
GCGGCGGCTGGTGGTTCCCT

Product: histone family protein nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTDIDLNALSLAELKQLEKNLAKAIASFEDRRKAEAGAAAEAVAKEHGFSLGELAKMTPAQKRAAVAPKYRHPENPEITW
SSRGREPGWIAEALEAGKSLEDFAI

Sequences:

>Translated_105_residues
MTDIDLNALSLAELKQLEKNLAKAIASFEDRRKAEAGAAAEAVAKEHGFSLGELAKMTPAQKRAAVAPKYRHPENPEITW
SSRGREPGWIAEALEAGKSLEDFAI
>Mature_104_residues
TDIDLNALSLAELKQLEKNLAKAIASFEDRRKAEAGAAAEAVAKEHGFSLGELAKMTPAQKRAAVAPKYRHPENPEITWS
SRGREPGWIAEALEAGKSLEDFAI

Specific function: It is a dim-light trans-acting activator of Puf and Puh expression, but has no effect on the expression of the Puc operon. It is responsible for regulating light-harvesting-I and reaction center structural gene expression differentially from that of light

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like protein H-NS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001801 [H]

Pfam domain/function: PF00816 Histone_HNS [H]

EC number: NA

Molecular weight: Translated: 11402; Mature: 11271

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIDLNALSLAELKQLEKNLAKAIASFEDRRKAEAGAAAEAVAKEHGFSLGELAKMTPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCH
QKRAAVAPKYRHPENPEITWSSRGREPGWIAEALEAGKSLEDFAI
HHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCHHHCC
>Mature Secondary Structure 
TDIDLNALSLAELKQLEKNLAKAIASFEDRRKAEAGAAAEAVAKEHGFSLGELAKMTPA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCH
QKRAAVAPKYRHPENPEITWSSRGREPGWIAEALEAGKSLEDFAI
HHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961455 [H]