| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386033
Identifier: 119386033
GI number: 119386033
Start: 478185
End: 478664
Strand: Direct
Name: 119386033
Synonym: Pden_3316
Alternate gene names: NA
Gene position: 478185-478664 (Clockwise)
Preceding gene: 119386032
Following gene: 119386034
Centisome position: 27.64
GC content: 63.12
Gene sequence:
>480_bases ATGAAGGTGCTTGTCCCGCTTGTCCTGGCCCTCGGAATCGCAACCCCCGCTGGTGCATTGGACGCCATCGGCGAGATCGG GGCAAACTTGGACGGTGAAGAACTGAACTGGCAGGTGATGCGTCAGGATGATGGCTCGGCGATGGTGCAGATCACCGATA TCGGCCCGCTGACCATGATCGAACTGCATGCACTTGGTGACGGCAGCATTTCTATCGGCCTGATCTTTCACGGCAAGCCT TCCGGAGATACGCCGCCCGCCGGTCTGACCATCGACATGCGGCCCGATCGCGGGGCGATGGCGGGCGCGGTCTGGGAAAG CGAGGAAGAGCCGCCGCAGATGTCGATCGACCTGCTGGATCTTGAGGATGAAGGCCGCATCCAGGCCAGCTTTGCGGCAA CCCTATGCCGCCGGGATGCCCCGGACGACTGTCGCGACGTCGAGGGGCGGATCGACACGTCGTTGGGTGCAGGCCCATGA
Upstream 100 bases:
>100_bases ACGGGATCATCAGTTTCTTCTCGGCCAATGAGGCGATGGGAACAAAACGCAATTCGGCGCGGGGCGTCCGCGAACAGCTG ATCAGCCGATAGGAATGCCA
Downstream 100 bases:
>100_bases CACTGGCCGAGTTTCTGGCTGATCCGCTGCGCGTGACGCAAATCTCCGACAGCGTGCTGGAGATCGAGAATCGTCCGGTC CGGCGGGCGGTGATTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKVLVPLVLALGIATPAGALDAIGEIGANLDGEELNWQVMRQDDGSAMVQITDIGPLTMIELHALGDGSISIGLIFHGKP SGDTPPAGLTIDMRPDRGAMAGAVWESEEEPPQMSIDLLDLEDEGRIQASFAATLCRRDAPDDCRDVEGRIDTSLGAGP
Sequences:
>Translated_159_residues MKVLVPLVLALGIATPAGALDAIGEIGANLDGEELNWQVMRQDDGSAMVQITDIGPLTMIELHALGDGSISIGLIFHGKP SGDTPPAGLTIDMRPDRGAMAGAVWESEEEPPQMSIDLLDLEDEGRIQASFAATLCRRDAPDDCRDVEGRIDTSLGAGP >Mature_159_residues MKVLVPLVLALGIATPAGALDAIGEIGANLDGEELNWQVMRQDDGSAMVQITDIGPLTMIELHALGDGSISIGLIFHGKP SGDTPPAGLTIDMRPDRGAMAGAVWESEEEPPQMSIDLLDLEDEGRIQASFAATLCRRDAPDDCRDVEGRIDTSLGAGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16689; Mature: 16689
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLVPLVLALGIATPAGALDAIGEIGANLDGEELNWQVMRQDDGSAMVQITDIGPLTMI CCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEE ELHALGDGSISIGLIFHGKPSGDTPPAGLTIDMRPDRGAMAGAVWESEEEPPQMSIDLLD EEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCEECEEECCCCCCCCEEEEEEE LEDEGRIQASFAATLCRRDAPDDCRDVEGRIDTSLGAGP CCCCCCEEHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure MKVLVPLVLALGIATPAGALDAIGEIGANLDGEELNWQVMRQDDGSAMVQITDIGPLTMI CCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEE ELHALGDGSISIGLIFHGKPSGDTPPAGLTIDMRPDRGAMAGAVWESEEEPPQMSIDLLD EEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCEECEEECCCCCCCCEEEEEEE LEDEGRIQASFAATLCRRDAPDDCRDVEGRIDTSLGAGP CCCCCCEEHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA