| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386034
Identifier: 119386034
GI number: 119386034
Start: 478661
End: 479188
Strand: Direct
Name: 119386034
Synonym: Pden_3317
Alternate gene names: NA
Gene position: 478661-479188 (Clockwise)
Preceding gene: 119386033
Following gene: 119386035
Centisome position: 27.67
GC content: 63.07
Gene sequence:
>528_bases ATGACACTGGCCGAGTTTCTGGCTGATCCGCTGCGCGTGACGCAAATCTCCGACAGCGTGCTGGAGATCGAGAATCGTCC GGTCCGGCGGGCGGTGATTGCTGCGGCGGTGATATTGGTGGCGATCGCGGCGGGCCTGGCAGCCATCGGGGATGGTGCGA CCGGAACGGGGATCATCGTGCTTGCCGTGGTGGGCCTGATCGGTTGGCTCTACATGCACGAGTTGGTGCAGCTGACTCAA CTGAGCCTGGACAGGCATGCCGGTCTTGTCCGGCTGCGTGTGACCACATTGCGCGGGCGGCGTGAAGAGACATTCGCACT CTCGGACCTGCACAAGCTGGAAAGCATCGCGCACTATGGCACGGCGGCAGGAAACGATGAGACCCGGCTGGTGCTGATTT GCGGATCGGGACCAGAGCGGCGCGAGATCATAGTGCCCATGTTCCGCCCGGATCCCGAAGAGGTGGCGCATCTGACGGGC GTCGTCAATGGCTGGCTTTCCCGCCAGGGAAAGGGAAACCCGTCATGA
Upstream 100 bases:
>100_bases GCATCCAGGCCAGCTTTGCGGCAACCCTATGCCGCCGGGATGCCCCGGACGACTGTCGCGACGTCGAGGGGCGGATCGAC ACGTCGTTGGGTGCAGGCCC
Downstream 100 bases:
>100_bases GTATTGAGACGAATACGCCCGAACGACTGGAACTGGAACTGGCGATACCGCGCTTTATCCTGTGGTTCGTCATGCTGCCT GTCCTGCCGATCACCCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTLAEFLADPLRVTQISDSVLEIENRPVRRAVIAAAVILVAIAAGLAAIGDGATGTGIIVLAVVGLIGWLYMHELVQLTQ LSLDRHAGLVRLRVTTLRGRREETFALSDLHKLESIAHYGTAAGNDETRLVLICGSGPERREIIVPMFRPDPEEVAHLTG VVNGWLSRQGKGNPS
Sequences:
>Translated_175_residues MTLAEFLADPLRVTQISDSVLEIENRPVRRAVIAAAVILVAIAAGLAAIGDGATGTGIIVLAVVGLIGWLYMHELVQLTQ LSLDRHAGLVRLRVTTLRGRREETFALSDLHKLESIAHYGTAAGNDETRLVLICGSGPERREIIVPMFRPDPEEVAHLTG VVNGWLSRQGKGNPS >Mature_174_residues TLAEFLADPLRVTQISDSVLEIENRPVRRAVIAAAVILVAIAAGLAAIGDGATGTGIIVLAVVGLIGWLYMHELVQLTQL SLDRHAGLVRLRVTTLRGRREETFALSDLHKLESIAHYGTAAGNDETRLVLICGSGPERREIIVPMFRPDPEEVAHLTGV VNGWLSRQGKGNPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18832; Mature: 18701
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAEFLADPLRVTQISDSVLEIENRPVRRAVIAAAVILVAIAAGLAAIGDGATGTGIIV CCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LAVVGLIGWLYMHELVQLTQLSLDRHAGLVRLRVTTLRGRREETFALSDLHKLESIAHYG HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHC TAAGNDETRLVLICGSGPERREIIVPMFRPDPEEVAHLTGVVNGWLSRQGKGNPS CCCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLAEFLADPLRVTQISDSVLEIENRPVRRAVIAAAVILVAIAAGLAAIGDGATGTGIIV CHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LAVVGLIGWLYMHELVQLTQLSLDRHAGLVRLRVTTLRGRREETFALSDLHKLESIAHYG HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHC TAAGNDETRLVLICGSGPERREIIVPMFRPDPEEVAHLTGVVNGWLSRQGKGNPS CCCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA