Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119385974

Identifier: 119385974

GI number: 119385974

Start: 416027

End: 417628

Strand: Direct

Name: 119385974

Synonym: Pden_3253

Alternate gene names: NA

Gene position: 416027-417628 (Clockwise)

Preceding gene: 119385973

Following gene: 119385975

Centisome position: 24.05

GC content: 67.85

Gene sequence:

>1602_bases
ATGAGCCAGACACTTGCCGTATTCCGCAACCGGACTTTCCGTGGACTCTGGCTCGGGACGGTGGCCTCGAACATGGGCGG
CTTGGTGCAACAGGTCGGCGCGGCTTGGCTGATGGCGACGATGACCAGTTCGGCGACGATGATCGCGCTGGTTCAGGCCT
GCGTCACCCTGCCGATTATGCTCGGCTCCTACCCCGCCGGGGTTCTGGCCGATTGCCGCGACCGGCGCAGGATCATGCAG
GTGGCGCAGATCTTCATGGCGGTGGTATCGGCGGCCCTGGCGGTTCTGGCCTGGATGGGGCAGGTCACCCCGGTTGTGTT
GCTGGTGTTCACGGCGCTCGTCGGCTGCGGAACCGCGCTGCAATTCCCGGCATGGCAGTCCTCCATCGGCGGGCTGGTGG
TGCGGGACGAACTGCCGGCGGCGATTTCCGCCAATGCGATGGGCACCAATCTGACCCGCAGCCTCGGCCCGGCCCTTGGC
GGCGCGATCGTCGCCGCTGCGGGATCGGCCATGGCCTTCGCCGTGAACGCCCTGTCCTATCTGGCGGTCATCGTCGCATT
GTGGCGCTGGCGGCCTGCGCGGTCCGAAAACGATCTGCCGGCTGAGAGCCTTTTCCCTGCGATGCGCGCCGGTGTGGTGT
ATTGCCTGTCTTCAGGCGACAAGTTGGGGGCGATCTGGCGTGGATTTCTGTTCTGCCTGGCGGCGATCGGGGTGCAGGCC
CTGCTGCCCGCGCTGGTGCGCGACGAGATCGCGGGTGGCGCCTCTATCTATGGGATCATGCTGGGGGCCTTCGGGGCGGG
TGCGGTGGGTGCGGCGCTGGTCAGCACCCGCCTCCGCGCCCGCTACGGGCTGGAGACCACCTGCCGGCTCGGCTTCGTCG
CCTTCGCGCTTGCCGTCGCGGCGCTGGCCATTGCGCCGGGGCTTGGCCTTGGGATCGCCGCGCTTCTGGTCTGCGGCGCA
GCCTGGCTGACGGTGCTGTCTTTGGTGAACATCTCGATTCAGGTCTCGACGCCGAAATGGGTTCTGGGCCGGATGATGGC
CATCTACATGACGGCGATCTTCGGGGGCATGACGCTGGGAAGCTGGCTCTGGGGCTACGTCTCTACCCTGGGCGGCCTGC
ACCTCGCCCTGCTGCTGTCGGCCGGCCTGCTGCTGCTCGGTGCGGCCTGGGGGCTTTGGGCGCCGCTGGTCGCCGCCGAG
CCGGACAGCATACTGCCGGCAGAGCTCCCCGCCTCACCGCAGCCCCGCGTTGCGCTGGGCCATGACAGCGGTCCGGTGCG
GATTTCGGTGGAATATGTGATCCCGGTCGAGCGGGAAGGCAGCTTCCTGACCGTAATGGAGGCGCGCCGCCGCAGCCGCG
CCCGGTCAGGGGTGTCGAACTGGTCGCTGTACCACGATGTCGAAGCCCCCTCGCAATGGATCGAGACCTACGGTTTCGCC
ACCTGGGGGGACTATCTGCGCCAGCGTGCGCGCAAGACGCGACAGGACGAGGCCATAATCGCGCAGTTGCATGCGCTCCA
TCACGGCGATCATCCGCCGCAGGTGCGCCGGATTGTAGGGACTCGCCGTCCGCAGACCCTGCGGGCACCACCTTTGCCGT
GA

Upstream 100 bases:

>100_bases
AGCCTTGCCGGGCTTGACCGGGCGGATGCCGAGGCCCGGACCCGGCTGGCAGGCGCTGTGTAGGCCAGCACCATATGAAA
TCCGCCAGTTCGAGATCCCG

Downstream 100 bases:

>100_bases
AATAAAGTTTTTGACCTTAAACAGTCTTATTGATTTAAATGATTATATGTGCCAGAACATGGCAGGAGGACGCTGATTCC
CGGTCGGCGCGACGCGAGGG

Product: protein of unknown function DUF894, DitE

Products: NA

Alternate protein names: MFS Family Transporter; Facilitator Superfamily Protein; Facilitator Transporter; MFS Transporter; Integral Membrane Efflux Protein; Facilitator Superfamily; Transport Transmembrane Protein; Facilitator Superfamily Permease; MFS Family Transporter Protein; Permease; Mfs Transporter; Transporter Facilitator Family; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transmembrane Transporter; Facilitator Superfamily Transporter; Transmembrane Efflux Protein; ABC Transporter Permease Protein; Facilitator Transpoter; Dioxygenase; MFS Family Diterpenoid Transporter; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MSQTLAVFRNRTFRGLWLGTVASNMGGLVQQVGAAWLMATMTSSATMIALVQACVTLPIMLGSYPAGVLADCRDRRRIMQ
VAQIFMAVVSAALAVLAWMGQVTPVVLLVFTALVGCGTALQFPAWQSSIGGLVVRDELPAAISANAMGTNLTRSLGPALG
GAIVAAAGSAMAFAVNALSYLAVIVALWRWRPARSENDLPAESLFPAMRAGVVYCLSSGDKLGAIWRGFLFCLAAIGVQA
LLPALVRDEIAGGASIYGIMLGAFGAGAVGAALVSTRLRARYGLETTCRLGFVAFALAVAALAIAPGLGLGIAALLVCGA
AWLTVLSLVNISIQVSTPKWVLGRMMAIYMTAIFGGMTLGSWLWGYVSTLGGLHLALLLSAGLLLLGAAWGLWAPLVAAE
PDSILPAELPASPQPRVALGHDSGPVRISVEYVIPVEREGSFLTVMEARRRSRARSGVSNWSLYHDVEAPSQWIETYGFA
TWGDYLRQRARKTRQDEAIIAQLHALHHGDHPPQVRRIVGTRRPQTLRAPPLP

Sequences:

>Translated_533_residues
MSQTLAVFRNRTFRGLWLGTVASNMGGLVQQVGAAWLMATMTSSATMIALVQACVTLPIMLGSYPAGVLADCRDRRRIMQ
VAQIFMAVVSAALAVLAWMGQVTPVVLLVFTALVGCGTALQFPAWQSSIGGLVVRDELPAAISANAMGTNLTRSLGPALG
GAIVAAAGSAMAFAVNALSYLAVIVALWRWRPARSENDLPAESLFPAMRAGVVYCLSSGDKLGAIWRGFLFCLAAIGVQA
LLPALVRDEIAGGASIYGIMLGAFGAGAVGAALVSTRLRARYGLETTCRLGFVAFALAVAALAIAPGLGLGIAALLVCGA
AWLTVLSLVNISIQVSTPKWVLGRMMAIYMTAIFGGMTLGSWLWGYVSTLGGLHLALLLSAGLLLLGAAWGLWAPLVAAE
PDSILPAELPASPQPRVALGHDSGPVRISVEYVIPVEREGSFLTVMEARRRSRARSGVSNWSLYHDVEAPSQWIETYGFA
TWGDYLRQRARKTRQDEAIIAQLHALHHGDHPPQVRRIVGTRRPQTLRAPPLP
>Mature_532_residues
SQTLAVFRNRTFRGLWLGTVASNMGGLVQQVGAAWLMATMTSSATMIALVQACVTLPIMLGSYPAGVLADCRDRRRIMQV
AQIFMAVVSAALAVLAWMGQVTPVVLLVFTALVGCGTALQFPAWQSSIGGLVVRDELPAAISANAMGTNLTRSLGPALGG
AIVAAAGSAMAFAVNALSYLAVIVALWRWRPARSENDLPAESLFPAMRAGVVYCLSSGDKLGAIWRGFLFCLAAIGVQAL
LPALVRDEIAGGASIYGIMLGAFGAGAVGAALVSTRLRARYGLETTCRLGFVAFALAVAALAIAPGLGLGIAALLVCGAA
WLTVLSLVNISIQVSTPKWVLGRMMAIYMTAIFGGMTLGSWLWGYVSTLGGLHLALLLSAGLLLLGAAWGLWAPLVAAEP
DSILPAELPASPQPRVALGHDSGPVRISVEYVIPVEREGSFLTVMEARRRSRARSGVSNWSLYHDVEAPSQWIETYGFAT
WGDYLRQRARKTRQDEAIIAQLHALHHGDHPPQVRRIVGTRRPQTLRAPPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56386; Mature: 56255

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTLAVFRNRTFRGLWLGTVASNMGGLVQQVGAAWLMATMTSSATMIALVQACVTLPIM
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LGSYPAGVLADCRDRRRIMQVAQIFMAVVSAALAVLAWMGQVTPVVLLVFTALVGCGTAL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QFPAWQSSIGGLVVRDELPAAISANAMGTNLTRSLGPALGGAIVAAAGSAMAFAVNALSY
CCCCHHHCCCCEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LAVIVALWRWRPARSENDLPAESLFPAMRAGVVYCLSSGDKLGAIWRGFLFCLAAIGVQA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
LLPALVRDEIAGGASIYGIMLGAFGAGAVGAALVSTRLRARYGLETTCRLGFVAFALAVA
HHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ALAIAPGLGLGIAALLVCGAAWLTVLSLVNISIQVSTPKWVLGRMMAIYMTAIFGGMTLG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
SWLWGYVSTLGGLHLALLLSAGLLLLGAAWGLWAPLVAAEPDSILPAELPASPQPRVALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEC
HDSGPVRISVEYVIPVEREGSFLTVMEARRRSRARSGVSNWSLYHDVEAPSQWIETYGFA
CCCCCEEEEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHCCCH
TWGDYLRQRARKTRQDEAIIAQLHALHHGDHPPQVRRIVGTRRPQTLRAPPLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SQTLAVFRNRTFRGLWLGTVASNMGGLVQQVGAAWLMATMTSSATMIALVQACVTLPIM
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LGSYPAGVLADCRDRRRIMQVAQIFMAVVSAALAVLAWMGQVTPVVLLVFTALVGCGTAL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QFPAWQSSIGGLVVRDELPAAISANAMGTNLTRSLGPALGGAIVAAAGSAMAFAVNALSY
CCCCHHHCCCCEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LAVIVALWRWRPARSENDLPAESLFPAMRAGVVYCLSSGDKLGAIWRGFLFCLAAIGVQA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
LLPALVRDEIAGGASIYGIMLGAFGAGAVGAALVSTRLRARYGLETTCRLGFVAFALAVA
HHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ALAIAPGLGLGIAALLVCGAAWLTVLSLVNISIQVSTPKWVLGRMMAIYMTAIFGGMTLG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
SWLWGYVSTLGGLHLALLLSAGLLLLGAAWGLWAPLVAAEPDSILPAELPASPQPRVALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEC
HDSGPVRISVEYVIPVEREGSFLTVMEARRRSRARSGVSNWSLYHDVEAPSQWIETYGFA
CCCCCEEEEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHCCCH
TWGDYLRQRARKTRQDEAIIAQLHALHHGDHPPQVRRIVGTRRPQTLRAPPLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA