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The map label for this gene is 119385973

Identifier: 119385973

GI number: 119385973

Start: 415612

End: 415989

Strand: Direct

Name: 119385973

Synonym: Pden_3252

Alternate gene names: NA

Gene position: 415612-415989 (Clockwise)

Preceding gene: 119385972

Following gene: 119385974

Centisome position: 24.02

GC content: 63.49

Gene sequence:

>378_bases
ATGAACAATTCGGGGCTCACTCTGCGCGAGATCTGTGCTCAACTCGATCTGACGGAGCGTGCTGTGCGCTACTACGAATA
CCTCGAACTGCTGCGCCCGCACTGCGTGGCGGGCAAGGGGCGCTACGGCCCACACGAGATCGCACGGCTCAAACTCATCC
GGCGTGGCCGCCGGTTCGGCATGAGGCTTGAGGCTCTGCCGCAATGGCTGGAACTCTATAATGTTGCCGGCGAACGGCGG
CAGATGGAAATCTGGTGCGAGATCAGCACCGAGTTGCGCCGGAACATGATCGAACAGCAAGCGCGCCTCAGTGAGAGCCT
TGCCGGGCTTGACCGGGCGGATGCCGAGGCCCGGACCCGGCTGGCAGGCGCTGTGTAG

Upstream 100 bases:

>100_bases
TTGCGGACGGACGTTGGCAGCGGATTCCAGAAACCTCGCATAATTTGCACTACGAGGAACCGGTCCTGATCGCGGCGCTG
CTGGAGGAGTTTTGGCGGGA

Downstream 100 bases:

>100_bases
GCCAGCACCATATGAAATCCGCCAGTTCGAGATCCCGATGAGCCAGACACTTGCCGTATTCCGCAACCGGACTTTCCGTG
GACTCTGGCTCGGGACGGTG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: MerR Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MNNSGLTLREICAQLDLTERAVRYYEYLELLRPHCVAGKGRYGPHEIARLKLIRRGRRFGMRLEALPQWLELYNVAGERR
QMEIWCEISTELRRNMIEQQARLSESLAGLDRADAEARTRLAGAV

Sequences:

>Translated_125_residues
MNNSGLTLREICAQLDLTERAVRYYEYLELLRPHCVAGKGRYGPHEIARLKLIRRGRRFGMRLEALPQWLELYNVAGERR
QMEIWCEISTELRRNMIEQQARLSESLAGLDRADAEARTRLAGAV
>Mature_125_residues
MNNSGLTLREICAQLDLTERAVRYYEYLELLRPHCVAGKGRYGPHEIARLKLIRRGRRFGMRLEALPQWLELYNVAGERR
QMEIWCEISTELRRNMIEQQARLSESLAGLDRADAEARTRLAGAV

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14530; Mature: 14530

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSGLTLREICAQLDLTERAVRYYEYLELLRPHCVAGKGRYGPHEIARLKLIRRGRRFG
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
MRLEALPQWLELYNVAGERRQMEIWCEISTELRRNMIEQQARLSESLAGLDRADAEARTR
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LAGAV
HHCCC
>Mature Secondary Structure
MNNSGLTLREICAQLDLTERAVRYYEYLELLRPHCVAGKGRYGPHEIARLKLIRRGRRFG
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
MRLEALPQWLELYNVAGERRQMEIWCEISTELRRNMIEQQARLSESLAGLDRADAEARTR
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LAGAV
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA