Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

Click here to switch to the map view.

The map label for this gene is 119385664

Identifier: 119385664

GI number: 119385664

Start: 104045

End: 104569

Strand: Direct

Name: 119385664

Synonym: Pden_2939

Alternate gene names: NA

Gene position: 104045-104569 (Clockwise)

Preceding gene: 119385657

Following gene: 119385665

Centisome position: 6.01

GC content: 70.48

Gene sequence:

>525_bases
ATGCGTTTTCTGCTGACATTCCATTCCGCGGCCACCGGGCAGTGGCGTTGCCTGGACACCGCGCTTCTTGCCGCGTTCCG
GTCGGGCAGGGCAGAGGACCTGCCCGCGGCCCTGCGCGACGAGCCGGAGCTGGCGATGCGCTGGCTGCTTGGGCGCTATG
AGATCGCCGAGGCGCTGACGCCCGCCGCGGAAGGCGCGGCACCGGCGCCACGGCAGGGCGACCTGATCGCGGTCTATGCC
CTTGGCGCCGAGCGATCCGTCATCGGCTTCGAGAACACCTATAACGGCGCCTGGCTGGAGATGTTCGTGCTGGAGAACCG
GCCGCTGGGCCATATCGCCGCCCGCAAGGTCATGGCTCCGGCGCGGGCGATGGCCTCGCTGGAGGATCGCGTGGCGCGTC
CCCTGCACGCCGCCGACGAAGCCTGCCGCCTGACGGTGAGCCGGATCATCGAGCATCAGCAGGTGCTGGACAGGCGGCGC
AAGGACGGCGCCGGCCGGACGACCCCCGAGGTGGAGAGAACCTGA

Upstream 100 bases:

>100_bases
ACGGCTGCGACATCGCCGCCCCTTGCAGGCGCGGGTTCTCGTGCCTAAGTGGCCCTCGTGACCCGCCGGCAGCAAGAACA
GAACAAAGGTCGAGCTGACG

Downstream 100 bases:

>100_bases
CGCCGGCCGGCCGCCGCGATGGTTCGGGCCGGCGGCGAGAGGTGCGCATCGGGCGGTTGACAGCTTGCCGGCAGAATTAT
AAACGAACGGTCGTATTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRFLLTFHSAATGQWRCLDTALLAAFRSGRAEDLPAALRDEPELAMRWLLGRYEIAEALTPAAEGAAPAPRQGDLIAVYA
LGAERSVIGFENTYNGAWLEMFVLENRPLGHIAARKVMAPARAMASLEDRVARPLHAADEACRLTVSRIIEHQQVLDRRR
KDGAGRTTPEVERT

Sequences:

>Translated_174_residues
MRFLLTFHSAATGQWRCLDTALLAAFRSGRAEDLPAALRDEPELAMRWLLGRYEIAEALTPAAEGAAPAPRQGDLIAVYA
LGAERSVIGFENTYNGAWLEMFVLENRPLGHIAARKVMAPARAMASLEDRVARPLHAADEACRLTVSRIIEHQQVLDRRR
KDGAGRTTPEVERT
>Mature_174_residues
MRFLLTFHSAATGQWRCLDTALLAAFRSGRAEDLPAALRDEPELAMRWLLGRYEIAEALTPAAEGAAPAPRQGDLIAVYA
LGAERSVIGFENTYNGAWLEMFVLENRPLGHIAARKVMAPARAMASLEDRVARPLHAADEACRLTVSRIIEHQQVLDRRR
KDGAGRTTPEVERT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19247; Mature: 19247

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLLTFHSAATGQWRCLDTALLAAFRSGRAEDLPAALRDEPELAMRWLLGRYEIAEALT
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC
PAAEGAAPAPRQGDLIAVYALGAERSVIGFENTYNGAWLEMFVLENRPLGHIAARKVMAP
CCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
ARAMASLEDRVARPLHAADEACRLTVSRIIEHQQVLDRRRKDGAGRTTPEVERT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRFLLTFHSAATGQWRCLDTALLAAFRSGRAEDLPAALRDEPELAMRWLLGRYEIAEALT
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHC
PAAEGAAPAPRQGDLIAVYALGAERSVIGFENTYNGAWLEMFVLENRPLGHIAARKVMAP
CCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
ARAMASLEDRVARPLHAADEACRLTVSRIIEHQQVLDRRRKDGAGRTTPEVERT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA