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The map label for this gene is 119385665

Identifier: 119385665

GI number: 119385665

Start: 104685

End: 105251

Strand: Direct

Name: 119385665

Synonym: Pden_2940

Alternate gene names: NA

Gene position: 104685-105251 (Clockwise)

Preceding gene: 119385664

Following gene: 119385666

Centisome position: 6.05

GC content: 67.72

Gene sequence:

>567_bases
ATGGGACGCAAGCGCACGATCGACCGCGACGAGCTGATGGCCGCCATCGAGCGGGTGGCGCGGCGCTCGGGCATCACCGG
GCTCAGCATCGACGCCGTCGCCAAGGAGGCGGGGATCAGCAAGTCCAGCGTGGTCTATGATTGCGACAGCAAGGCCGGGC
TGCTGGCCGCCTTCATCCGCCACAAGATGGCCCAGCATCAGGCGCGCTTCGTCGAGATCCGTGCCCGGCGCGAGGGCGAG
CCGAACGCGCGGCTGCGCGCGCTGATCGACGAATACCGCCGCGTGCCGACCGACGAGGAGCTGGACATGGCGCTGCTGGT
CAGCGCCAGCATGGGCGAGCATGCCGAATGCCGCGAGATCATGCGCGAAAAGCTGGCCAGCGATGCCGAGACGGTGGCGG
CCCAGGCGGCCGACCGGCGGCGGATGCTGATGGCGCTGCTGACGCTGCACGGCATGGCGTTCCTGGAATATTTCGGCTTC
CACCGTTTCGACCAGGAAACCCGCAACGAGATCCTTGATGAATTGATGGCGGTCGCGGAAAGCGACCCCGGCGCAGCCGG
AGACTGA

Upstream 100 bases:

>100_bases
GCGATGGTTCGGGCCGGCGGCGAGAGGTGCGCATCGGGCGGTTGACAGCTTGCCGGCAGAATTATAAACGAACGGTCGTA
TTGAAATTATCGGACCGGAT

Downstream 100 bases:

>100_bases
CCCCTCCCCGAACCATTCAGCCTTCCCAGGAAAGAACCATGACCATGAGACTTTCTCCCGGCGTCTGCGCCGGGCTTGTG
CTTTGCTGCCTGATGGCGGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MGRKRTIDRDELMAAIERVARRSGITGLSIDAVAKEAGISKSSVVYDCDSKAGLLAAFIRHKMAQHQARFVEIRARREGE
PNARLRALIDEYRRVPTDEELDMALLVSASMGEHAECREIMREKLASDAETVAAQAADRRRMLMALLTLHGMAFLEYFGF
HRFDQETRNEILDELMAVAESDPGAAGD

Sequences:

>Translated_188_residues
MGRKRTIDRDELMAAIERVARRSGITGLSIDAVAKEAGISKSSVVYDCDSKAGLLAAFIRHKMAQHQARFVEIRARREGE
PNARLRALIDEYRRVPTDEELDMALLVSASMGEHAECREIMREKLASDAETVAAQAADRRRMLMALLTLHGMAFLEYFGF
HRFDQETRNEILDELMAVAESDPGAAGD
>Mature_187_residues
GRKRTIDRDELMAAIERVARRSGITGLSIDAVAKEAGISKSSVVYDCDSKAGLLAAFIRHKMAQHQARFVEIRARREGEP
NARLRALIDEYRRVPTDEELDMALLVSASMGEHAECREIMREKLASDAETVAAQAADRRRMLMALLTLHGMAFLEYFGFH
RFDQETRNEILDELMAVAESDPGAAGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21010; Mature: 20879

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKRTIDRDELMAAIERVARRSGITGLSIDAVAKEAGISKSSVVYDCDSKAGLLAAFIR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHH
HKMAQHQARFVEIRARREGEPNARLRALIDEYRRVPTDEELDMALLVSASMGEHAECREI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHH
MREKLASDAETVAAQAADRRRMLMALLTLHGMAFLEYFGFHRFDQETRNEILDELMAVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
SDPGAAGD
CCCCCCCC
>Mature Secondary Structure 
GRKRTIDRDELMAAIERVARRSGITGLSIDAVAKEAGISKSSVVYDCDSKAGLLAAFIR
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHH
HKMAQHQARFVEIRARREGEPNARLRALIDEYRRVPTDEELDMALLVSASMGEHAECREI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHH
MREKLASDAETVAAQAADRRRMLMALLTLHGMAFLEYFGFHRFDQETRNEILDELMAVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
SDPGAAGD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA