| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is zntR [C]
Identifier: 119385592
GI number: 119385592
Start: 32576
End: 33085
Strand: Direct
Name: zntR [C]
Synonym: Pden_2867
Alternate gene names: 119385592
Gene position: 32576-33085 (Clockwise)
Preceding gene: 119385591
Following gene: 119385593
Centisome position: 1.88
GC content: 65.69
Gene sequence:
>510_bases ATGCCGGCGAGGCCGGGAAAGCGGGCTGAGCCCGGCGCTGACGCCACGTTCCCCCTTACGCGAACGTCAACTCGCCCTAT ATTCCGGCTGGTGAATGAGCCAGACGGGAGGGGATCGGCCATGAGCGACGATCTGTTGACCATCCGCCAGATGTGCGACG CCTTCGAGGTCACGCCGCGCACGCTGCGTTTCTACGAGGCGCGCGAATTGCTGTTTCCGCAGCGGCGCGGCCAGCATCGG CTTTACGGGCGCTCGGACCGCGCCCGGCTGACCCTTATCCTGCGCGGCAAGCGTTTCGGCTTTTCGCTGGAGCAGATCCG CCAATTGCTGGAGCTTTACGATCCGGCCGAACGCAACATTACCCAGACCGAAGCCACGCTCGCCACCGCCCGCGACCGGC TTGCCGACATGGAGCGGCAGCACCGCGAACTGGGCGAGGCCATCGCCGAACTGCGCCAGCAGATCGCCGAGGGCGAAGCT TCGCTGCAAAACCTGAAATCCGACGCCTGA
Upstream 100 bases:
>100_bases CTGCGCCAGCAGCGCGACGAACTCGAAGCCTCGATGACCGAATTGCTGGCGCTGCGCAACGAAACGGTCTCGCTGCTCGA CGGCATGGGGCCGACCGAGG
Downstream 100 bases:
>100_bases GGGCGAACTGTCCTGGGAGGACCGATGACCATTTATTCCGCCCCCATCCGCGACATGCAATTCGTGCTGCATGACGTGCT CGACATCTCGAACCAGGATC
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Transcriptional Regulator Merr Family; Mercuric Resistance Operon Regulatory Protein; Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; MerR Family Regulatory Family; Regulatory Protein; Transcription Regulator Protein
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPARPGKRAEPGADATFPLTRTSTRPIFRLVNEPDGRGSAMSDDLLTIRQMCDAFEVTPRTLRFYEARELLFPQRRGQHR LYGRSDRARLTLILRGKRFGFSLEQIRQLLELYDPAERNITQTEATLATARDRLADMERQHRELGEAIAELRQQIAEGEA SLQNLKSDA
Sequences:
>Translated_169_residues MPARPGKRAEPGADATFPLTRTSTRPIFRLVNEPDGRGSAMSDDLLTIRQMCDAFEVTPRTLRFYEARELLFPQRRGQHR LYGRSDRARLTLILRGKRFGFSLEQIRQLLELYDPAERNITQTEATLATARDRLADMERQHRELGEAIAELRQQIAEGEA SLQNLKSDA >Mature_168_residues PARPGKRAEPGADATFPLTRTSTRPIFRLVNEPDGRGSAMSDDLLTIRQMCDAFEVTPRTLRFYEARELLFPQRRGQHRL YGRSDRARLTLILRGKRFGFSLEQIRQLLELYDPAERNITQTEATLATARDRLADMERQHRELGEAIAELRQQIAEGEAS LQNLKSDA
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19354; Mature: 19223
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARPGKRAEPGADATFPLTRTSTRPIFRLVNEPDGRGSAMSDDLLTIRQMCDAFEVTPR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHH TLRFYEARELLFPQRRGQHRLYGRSDRARLTLILRGKRFGFSLEQIRQLLELYDPAERNI HHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCC TQTEATLATARDRLADMERQHRELGEAIAELRQQIAEGEASLQNLKSDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PARPGKRAEPGADATFPLTRTSTRPIFRLVNEPDGRGSAMSDDLLTIRQMCDAFEVTPR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHH TLRFYEARELLFPQRRGQHRLYGRSDRARLTLILRGKRFGFSLEQIRQLLELYDPAERNI HHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCC TQTEATLATARDRLADMERQHRELGEAIAELRQQIAEGEASLQNLKSDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA