Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is zntR [C]

Identifier: 119385592

GI number: 119385592

Start: 32576

End: 33085

Strand: Direct

Name: zntR [C]

Synonym: Pden_2867

Alternate gene names: 119385592

Gene position: 32576-33085 (Clockwise)

Preceding gene: 119385591

Following gene: 119385593

Centisome position: 1.88

GC content: 65.69

Gene sequence:

>510_bases
ATGCCGGCGAGGCCGGGAAAGCGGGCTGAGCCCGGCGCTGACGCCACGTTCCCCCTTACGCGAACGTCAACTCGCCCTAT
ATTCCGGCTGGTGAATGAGCCAGACGGGAGGGGATCGGCCATGAGCGACGATCTGTTGACCATCCGCCAGATGTGCGACG
CCTTCGAGGTCACGCCGCGCACGCTGCGTTTCTACGAGGCGCGCGAATTGCTGTTTCCGCAGCGGCGCGGCCAGCATCGG
CTTTACGGGCGCTCGGACCGCGCCCGGCTGACCCTTATCCTGCGCGGCAAGCGTTTCGGCTTTTCGCTGGAGCAGATCCG
CCAATTGCTGGAGCTTTACGATCCGGCCGAACGCAACATTACCCAGACCGAAGCCACGCTCGCCACCGCCCGCGACCGGC
TTGCCGACATGGAGCGGCAGCACCGCGAACTGGGCGAGGCCATCGCCGAACTGCGCCAGCAGATCGCCGAGGGCGAAGCT
TCGCTGCAAAACCTGAAATCCGACGCCTGA

Upstream 100 bases:

>100_bases
CTGCGCCAGCAGCGCGACGAACTCGAAGCCTCGATGACCGAATTGCTGGCGCTGCGCAACGAAACGGTCTCGCTGCTCGA
CGGCATGGGGCCGACCGAGG

Downstream 100 bases:

>100_bases
GGGCGAACTGTCCTGGGAGGACCGATGACCATTTATTCCGCCCCCATCCGCGACATGCAATTCGTGCTGCATGACGTGCT
CGACATCTCGAACCAGGATC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Transcriptional Regulator Merr Family; Mercuric Resistance Operon Regulatory Protein; Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; MerR Family Regulatory Family; Regulatory Protein; Transcription Regulator Protein

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MPARPGKRAEPGADATFPLTRTSTRPIFRLVNEPDGRGSAMSDDLLTIRQMCDAFEVTPRTLRFYEARELLFPQRRGQHR
LYGRSDRARLTLILRGKRFGFSLEQIRQLLELYDPAERNITQTEATLATARDRLADMERQHRELGEAIAELRQQIAEGEA
SLQNLKSDA

Sequences:

>Translated_169_residues
MPARPGKRAEPGADATFPLTRTSTRPIFRLVNEPDGRGSAMSDDLLTIRQMCDAFEVTPRTLRFYEARELLFPQRRGQHR
LYGRSDRARLTLILRGKRFGFSLEQIRQLLELYDPAERNITQTEATLATARDRLADMERQHRELGEAIAELRQQIAEGEA
SLQNLKSDA
>Mature_168_residues
PARPGKRAEPGADATFPLTRTSTRPIFRLVNEPDGRGSAMSDDLLTIRQMCDAFEVTPRTLRFYEARELLFPQRRGQHRL
YGRSDRARLTLILRGKRFGFSLEQIRQLLELYDPAERNITQTEATLATARDRLADMERQHRELGEAIAELRQQIAEGEAS
LQNLKSDA

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19354; Mature: 19223

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARPGKRAEPGADATFPLTRTSTRPIFRLVNEPDGRGSAMSDDLLTIRQMCDAFEVTPR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHH
TLRFYEARELLFPQRRGQHRLYGRSDRARLTLILRGKRFGFSLEQIRQLLELYDPAERNI
HHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCC
TQTEATLATARDRLADMERQHRELGEAIAELRQQIAEGEASLQNLKSDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PARPGKRAEPGADATFPLTRTSTRPIFRLVNEPDGRGSAMSDDLLTIRQMCDAFEVTPR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHH
TLRFYEARELLFPQRRGQHRLYGRSDRARLTLILRGKRFGFSLEQIRQLLELYDPAERNI
HHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHCCC
TQTEATLATARDRLADMERQHRELGEAIAELRQQIAEGEASLQNLKSDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA