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The map label for this gene is mmgC [H]

Identifier: 119385593

GI number: 119385593

Start: 33110

End: 34888

Strand: Direct

Name: mmgC [H]

Synonym: Pden_2868

Alternate gene names: 119385593

Gene position: 33110-34888 (Clockwise)

Preceding gene: 119385592

Following gene: 119385594

Centisome position: 1.91

GC content: 66.44

Gene sequence:

>1779_bases
ATGACCATTTATTCCGCCCCCATCCGCGACATGCAATTCGTGCTGCATGACGTGCTCGACATCTCGAACCAGGATCTTCC
GGGCTATGGCGATCTTGACCGCGACTTCACGCAGGCCGTGCTGGAGGCGTCCGGCAAGCTCGCCTCCGAAGTGCTGGCGC
CGCTGAATGCCGTCGGCGACCGCGAGGGCTGCAGGCTGGAAAACGGCGTGGTGCATACGCCCAAGGGCTTTCTCGAAGCC
TTCGAGCAGATGCGCGAGGGCGGCTGGACCGCGCTCGACTGCGACCCGGAATACGGCGGCCAAGGCATGCCCTATGTGAT
CGGCCTTGCGGCGGGCGAGATGTTCTCGGCCTCGAACATGGCCTTCACCATGTATCAGGGCCTGACCCATGGCGCCTATT
CCGCCATCCACGCCCACGGCACGGACCAGCAGAAGGCCACCTACCTGCCCAGGATGGTCAGCTGCGAATGGACCGGCACC
ATGAACCTGACCGAGCCGCATGCCGGCACCGACCTGGGCCTGCTGCGCACCAAGGCCGAGCCGCAGGAGGATGGCAGCTA
CCTGATCACCGGGCAGAAGATCTTCATCTCGGCCGGCGACCACGACATGGCGCAGAACGTGATCCACCTGGTGCTGGCCA
AGGCGCCGGGCGGCGGCGAGGGCACCAGGGGCATCTCGCTTTTCATCGTGCCGAAGTTCCTGGTGAACGAGGACGGCTCC
CCGGGCGAACGCAACGCACTCTCGGTCGGCAACCTCGAGGAAAAGATGGGCATTCACGGCAATGCCACCTGCGTGATGAA
CTATGACGGCGCGAAAGGCTGGCTCTTGGGCGAGCTGCACAAGGGCATGCGCGCCATGTTCACCATGATGAACGAAGCGC
GGATCGGCGTCGGCCTGCAAGGCTATTCCGTGGCCGAGGCCGCCTATCAGAACGCGGTGGCCTATGCCCGCGACCGGCTG
CAGGGCCGCGCGGTGACGGGCGATGCCAACCCCTCGGGCCCGGCCGATCCGCTGATCGTGCATCCCGACATCCGCCGCAA
CCTGATGGACCAGAAAAGCTTTCTGGAAGGCGCGCGCGCGCTGGCCTTCTGGGGGGCGCACCTGATCGACCGCGCCGTGC
TGGCCGATGACAAGGAGGCCCACGACCTCGTCTCGCTGCTGACGCCGGTGATCAAGGGCTTCCTGACCGACAAGGGTTTC
GAGACGGCGGTGCAGGCCCAGCAGGTCTTCGGCGGCCACGGCTATATCGAGGAACAGGGCATGTCGCAATTCGTCCGCGA
CGCCCGCATCACCATGATCTACGAAGGCGCGAACGGCGTGCAGGCGCTGGACCTCGTGGGCCGCAAGCTGGCGGCCGAGG
GCGGCAAGCCGATCATGGCCTTCTTCGAGCTGATCAGGTCCGAGATCAAGGCGCACGAGGGCGACGAGGCGCTGAAGGCC
GATTTCCTCGATCCGCTGAAGGCGGCCTCGAAGGACCTGCAATCGGCAGCGATGTTCTTCATGGAGCAGGGCATGAAGGA
CCCGAACGCAGCGCTGGCCGGCTCCTACGACTTCATGCACCTGTTCGGCCATGCGGCGCTGGGGCTGATGTGGACGCGCA
TGGCGGTCGCGGCCAGGGCCGCTCTGGCGGCCGGCACCGAGGACCCCGCCTTCCACGAGGCCAAGCTGGCGACCGGCCGC
TATTACATGGCGCGGCAGCTGCCGATGACCGCGGCGCATCTGGCGCGCATCCGCTCGGGCGCCGAGCCGGTGATGGCGCT
GGCGGCGGATCGGTTCTGA

Upstream 100 bases:

>100_bases
CGAGGCCATCGCCGAACTGCGCCAGCAGATCGCCGAGGGCGAAGCTTCGCTGCAAAACCTGAAATCCGACGCCTGAGGGC
GAACTGTCCTGGGAGGACCG

Downstream 100 bases:

>100_bases
AACGGGAAAGGGAGGGTCTGGCGGCAAGGTCGCACGGGTATTTGGAAAACGGAAAAGACCGGAATGCGGCGCCCCGGAAC
ACCGGGTCCGGCCGAGGTTC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 591

Protein sequence:

>592_residues
MTIYSAPIRDMQFVLHDVLDISNQDLPGYGDLDRDFTQAVLEASGKLASEVLAPLNAVGDREGCRLENGVVHTPKGFLEA
FEQMREGGWTALDCDPEYGGQGMPYVIGLAAGEMFSASNMAFTMYQGLTHGAYSAIHAHGTDQQKATYLPRMVSCEWTGT
MNLTEPHAGTDLGLLRTKAEPQEDGSYLITGQKIFISAGDHDMAQNVIHLVLAKAPGGGEGTRGISLFIVPKFLVNEDGS
PGERNALSVGNLEEKMGIHGNATCVMNYDGAKGWLLGELHKGMRAMFTMMNEARIGVGLQGYSVAEAAYQNAVAYARDRL
QGRAVTGDANPSGPADPLIVHPDIRRNLMDQKSFLEGARALAFWGAHLIDRAVLADDKEAHDLVSLLTPVIKGFLTDKGF
ETAVQAQQVFGGHGYIEEQGMSQFVRDARITMIYEGANGVQALDLVGRKLAAEGGKPIMAFFELIRSEIKAHEGDEALKA
DFLDPLKAASKDLQSAAMFFMEQGMKDPNAALAGSYDFMHLFGHAALGLMWTRMAVAARAALAAGTEDPAFHEAKLATGR
YYMARQLPMTAAHLARIRSGAEPVMALAADRF

Sequences:

>Translated_592_residues
MTIYSAPIRDMQFVLHDVLDISNQDLPGYGDLDRDFTQAVLEASGKLASEVLAPLNAVGDREGCRLENGVVHTPKGFLEA
FEQMREGGWTALDCDPEYGGQGMPYVIGLAAGEMFSASNMAFTMYQGLTHGAYSAIHAHGTDQQKATYLPRMVSCEWTGT
MNLTEPHAGTDLGLLRTKAEPQEDGSYLITGQKIFISAGDHDMAQNVIHLVLAKAPGGGEGTRGISLFIVPKFLVNEDGS
PGERNALSVGNLEEKMGIHGNATCVMNYDGAKGWLLGELHKGMRAMFTMMNEARIGVGLQGYSVAEAAYQNAVAYARDRL
QGRAVTGDANPSGPADPLIVHPDIRRNLMDQKSFLEGARALAFWGAHLIDRAVLADDKEAHDLVSLLTPVIKGFLTDKGF
ETAVQAQQVFGGHGYIEEQGMSQFVRDARITMIYEGANGVQALDLVGRKLAAEGGKPIMAFFELIRSEIKAHEGDEALKA
DFLDPLKAASKDLQSAAMFFMEQGMKDPNAALAGSYDFMHLFGHAALGLMWTRMAVAARAALAAGTEDPAFHEAKLATGR
YYMARQLPMTAAHLARIRSGAEPVMALAADRF
>Mature_591_residues
TIYSAPIRDMQFVLHDVLDISNQDLPGYGDLDRDFTQAVLEASGKLASEVLAPLNAVGDREGCRLENGVVHTPKGFLEAF
EQMREGGWTALDCDPEYGGQGMPYVIGLAAGEMFSASNMAFTMYQGLTHGAYSAIHAHGTDQQKATYLPRMVSCEWTGTM
NLTEPHAGTDLGLLRTKAEPQEDGSYLITGQKIFISAGDHDMAQNVIHLVLAKAPGGGEGTRGISLFIVPKFLVNEDGSP
GERNALSVGNLEEKMGIHGNATCVMNYDGAKGWLLGELHKGMRAMFTMMNEARIGVGLQGYSVAEAAYQNAVAYARDRLQ
GRAVTGDANPSGPADPLIVHPDIRRNLMDQKSFLEGARALAFWGAHLIDRAVLADDKEAHDLVSLLTPVIKGFLTDKGFE
TAVQAQQVFGGHGYIEEQGMSQFVRDARITMIYEGANGVQALDLVGRKLAAEGGKPIMAFFELIRSEIKAHEGDEALKAD
FLDPLKAASKDLQSAAMFFMEQGMKDPNAALAGSYDFMHLFGHAALGLMWTRMAVAARAALAAGTEDPAFHEAKLATGRY
YMARQLPMTAAHLARIRSGAEPVMALAADRF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=412, Percent_Identity=27.4271844660194, Blast_Score=133, Evalue=5e-31,
Organism=Homo sapiens, GI7656849, Length=361, Percent_Identity=28.5318559556787, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI4557233, Length=373, Percent_Identity=29.4906166219839, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI21361497, Length=370, Percent_Identity=26.4864864864865, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI226958412, Length=389, Percent_Identity=26.4781491002571, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI226958414, Length=385, Percent_Identity=26.4935064935065, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4557235, Length=426, Percent_Identity=24.6478873239437, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI76496475, Length=426, Percent_Identity=24.6478873239437, Blast_Score=90, Evalue=7e-18,
Organism=Homo sapiens, GI4501857, Length=340, Percent_Identity=25, Blast_Score=81, Evalue=3e-15,
Organism=Escherichia coli, GI87082384, Length=295, Percent_Identity=33.8983050847458, Blast_Score=136, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17508101, Length=360, Percent_Identity=26.6666666666667, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71985184, Length=538, Percent_Identity=25.8364312267658, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=360, Percent_Identity=25.8333333333333, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17533517, Length=431, Percent_Identity=25.9860788863109, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=344, Percent_Identity=27.3255813953488, Blast_Score=95, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI86563381, Length=344, Percent_Identity=27.3255813953488, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=382, Percent_Identity=24.3455497382199, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=250, Percent_Identity=28, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=229, Percent_Identity=28.3842794759825, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17569725, Length=322, Percent_Identity=25.1552795031056, Blast_Score=86, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=322, Percent_Identity=25.4658385093168, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71985192, Length=256, Percent_Identity=27.34375, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17551932, Length=411, Percent_Identity=22.6277372262774, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24666513, Length=405, Percent_Identity=26.6666666666667, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21356377, Length=374, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24646207, Length=381, Percent_Identity=27.0341207349081, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI21355753, Length=393, Percent_Identity=25.4452926208651, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI281363737, Length=327, Percent_Identity=25.9938837920489, Blast_Score=95, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63911; Mature: 63779

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYSAPIRDMQFVLHDVLDISNQDLPGYGDLDRDFTQAVLEASGKLASEVLAPLNAVGD
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC
REGCRLENGVVHTPKGFLEAFEQMREGGWTALDCDPEYGGQGMPYVIGLAAGEMFSASNM
CCCCEECCCEEECCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
AFTMYQGLTHGAYSAIHAHGTDQQKATYLPRMVSCEWTGTMNLTEPHAGTDLGLLRTKAE
EEEHHHCCCHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCC
PQEDGSYLITGQKIFISAGDHDMAQNVIHLVLAKAPGGGEGTRGISLFIVPKFLVNEDGS
CCCCCCEEEECCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHEECCCCC
PGERNALSVGNLEEKMGIHGNATCVMNYDGAKGWLLGELHKGMRAMFTMMNEARIGVGLQ
CCCCCCEECCCHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GYSVAEAAYQNAVAYARDRLQGRAVTGDANPSGPADPLIVHPDIRRNLMDQKSFLEGARA
CCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
LAFWGAHLIDRAVLADDKEAHDLVSLLTPVIKGFLTDKGFETAVQAQQVFGGHGYIEEQG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH
MSQFVRDARITMIYEGANGVQALDLVGRKLAAEGGKPIMAFFELIRSEIKAHEGDEALKA
HHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
DFLDPLKAASKDLQSAAMFFMEQGMKDPNAALAGSYDFMHLFGHAALGLMWTRMAVAARA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALAAGTEDPAFHEAKLATGRYYMARQLPMTAAHLARIRSGAEPVMALAADRF
HHHCCCCCCCHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCC
>Mature Secondary Structure 
TIYSAPIRDMQFVLHDVLDISNQDLPGYGDLDRDFTQAVLEASGKLASEVLAPLNAVGD
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC
REGCRLENGVVHTPKGFLEAFEQMREGGWTALDCDPEYGGQGMPYVIGLAAGEMFSASNM
CCCCEECCCEEECCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
AFTMYQGLTHGAYSAIHAHGTDQQKATYLPRMVSCEWTGTMNLTEPHAGTDLGLLRTKAE
EEEHHHCCCHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCC
PQEDGSYLITGQKIFISAGDHDMAQNVIHLVLAKAPGGGEGTRGISLFIVPKFLVNEDGS
CCCCCCEEEECCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHEECCCCC
PGERNALSVGNLEEKMGIHGNATCVMNYDGAKGWLLGELHKGMRAMFTMMNEARIGVGLQ
CCCCCCEECCCHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GYSVAEAAYQNAVAYARDRLQGRAVTGDANPSGPADPLIVHPDIRRNLMDQKSFLEGARA
CCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
LAFWGAHLIDRAVLADDKEAHDLVSLLTPVIKGFLTDKGFETAVQAQQVFGGHGYIEEQG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH
MSQFVRDARITMIYEGANGVQALDLVGRKLAAEGGKPIMAFFELIRSEIKAHEGDEALKA
HHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
DFLDPLKAASKDLQSAAMFFMEQGMKDPNAALAGSYDFMHLFGHAALGLMWTRMAVAARA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALAAGTEDPAFHEAKLATGRYYMARQLPMTAAHLARIRSGAEPVMALAADRF
HHHCCCCCCCHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]