| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is zntR [C]
Identifier: 119385591
GI number: 119385591
Start: 32188
End: 32604
Strand: Direct
Name: zntR [C]
Synonym: Pden_2866
Alternate gene names: 119385591
Gene position: 32188-32604 (Clockwise)
Preceding gene: 119385587
Following gene: 119385592
Centisome position: 1.86
GC content: 63.55
Gene sequence:
>417_bases ATGTCCGATAGCGAATACATTGGTTTCAAGGAAATGTGCGCGCGGTTCGACGTGACTCCGCGAACGCTGCGCTATTACGA ATACATCGAGCTGCTCAGCCCCCGCAAGGAAGGCCGCTCGCGCTTCTACGGCCCGCGAGAGATCGCCCGGATGAAGCTGA TCCTGCGCGGCCGCCGCTTCGGCTTCTCGCTGGAGGACATCCGGCAATGGCTGCTGATCTATGGCGAAAAGGGCACGCGC GAACAGTATCGGGTCTGGATCGAACTGGCCGACCGCCAGCTCGAGGTGCTGCGCCAGCAGCGCGACGAACTCGAAGCCTC GATGACCGAATTGCTGGCGCTGCGCAACGAAACGGTCTCGCTGCTCGACGGCATGGGGCCGACCGAGGATGCCGGCGAGG CCGGGAAAGCGGGCTGA
Upstream 100 bases:
>100_bases AGCAGTCCGAAACCGGCAGGCAAGCCCGCCCCGGCCAATGGTTGAGTTTGATGCGGCCCCGCGCTAGGCTGCGCCGCATC TGCAGCATAGAGTTCATCCG
Downstream 100 bases:
>100_bases GCCCGGCGCTGACGCCACGTTCCCCCTTACGCGAACGTCAACTCGCCCTATATTCCGGCTGGTGAATGAGCCAGACGGGA GGGGATCGGCCATGAGCGAC
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Transcriptional Regulator Merr Family; Regulatory Protein MerR; MerR Family Regulatory Family; Transcription Regulator Protein; Mercuric Resistance Operon Regulatory Protein
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSDSEYIGFKEMCARFDVTPRTLRYYEYIELLSPRKEGRSRFYGPREIARMKLILRGRRFGFSLEDIRQWLLIYGEKGTR EQYRVWIELADRQLEVLRQQRDELEASMTELLALRNETVSLLDGMGPTEDAGEAGKAG
Sequences:
>Translated_138_residues MSDSEYIGFKEMCARFDVTPRTLRYYEYIELLSPRKEGRSRFYGPREIARMKLILRGRRFGFSLEDIRQWLLIYGEKGTR EQYRVWIELADRQLEVLRQQRDELEASMTELLALRNETVSLLDGMGPTEDAGEAGKAG >Mature_137_residues SDSEYIGFKEMCARFDVTPRTLRYYEYIELLSPRKEGRSRFYGPREIARMKLILRGRRFGFSLEDIRQWLLIYGEKGTRE QYRVWIELADRQLEVLRQQRDELEASMTELLALRNETVSLLDGMGPTEDAGEAGKAG
Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16206; Mature: 16075
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSEYIGFKEMCARFDVTPRTLRYYEYIELLSPRKEGRSRFYGPREIARMKLILRGRRF CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCC GFSLEDIRQWLLIYGEKGTREQYRVWIELADRQLEVLRQQRDELEASMTELLALRNETVS CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDGMGPTEDAGEAGKAG HHHCCCCCCCCCCCCCCC >Mature Secondary Structure SDSEYIGFKEMCARFDVTPRTLRYYEYIELLSPRKEGRSRFYGPREIARMKLILRGRRF CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCC GFSLEDIRQWLLIYGEKGTREQYRVWIELADRQLEVLRQQRDELEASMTELLALRNETVS CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDGMGPTEDAGEAGKAG HHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA