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The map label for this gene is 119358499

Identifier: 119358499

GI number: 119358499

Start: 3126453

End: 3127289

Strand: Direct

Name: 119358499

Synonym: Cpha266_2735

Alternate gene names: NA

Gene position: 3126453-3127289 (Clockwise)

Preceding gene: 119358498

Following gene: 119358500

Centisome position: 99.76

GC content: 49.46

Gene sequence:

>837_bases
ATGAACAATAACAGCCAGCCATACAGTCCCGGGGGGTTCCAGGTAATTCCCCCGGCTATAAAGCTTATCATTCTTGCCAA
TGTGGCGATATTTTTATTCCAGACCAGCGGACTTGGCGCATTTATTACCGCCTATGGAGCGTTGTGGCCGATCAATTCGC
ATAACGACACTGGCCTCTCGTTTCAGATATGGCAACCGGTAACCTACATGTTTCTTCATGGCAGCATGGGGCACCTGTTC
TTCAATATGTTCGCGCTCTGGATTTTCGGAACGGAGATTGAAAATTACTGGGGAACCCGTCAGTTCACGATCTATTATTT
TATCTGCGGCATCGGAGCCGCACTTATCAACCTGCTGACGACCATCGGAGACCCGTACTCTACTGTCGGCGCTTCGGGAG
CTATTTACGGCATTCTCCTCGCTTTCGGGATGATGTTTCCTGAACGGTACATCTATCTCTATTTTCTGCTTCCGGTTAAA
GCAAAATATTTTGTTGCGGGCTATGCCTTTCTTGAATTCATTTCGGGCCTTGGCAGCAGAACTATGGGCAGCGGAAGCAA
TATCGCGCATTTCGCCCATCTCGGCGGTATGCTTGTCGGGTTTATCTACATAACCCTGAAACGTCAGGAGTGGTCGCTTT
CCCGTTTCATCAGCAAGGCTCGCCCTGCTCTTCCGAAAAAGAAGAGCGCAGCGATCCACAACATCAGTTCCGGCACTACC
AAACCGTCAGAAGAGGAAATCGACGCCATTCTTGACAAGATCTCGCGTAACGGTTATGAATCATTAACCGGGCAGGAACG
ACAAAAACTGCTCAAAGCGGGGGGCAAAGAGTCATGA

Upstream 100 bases:

>100_bases
GATTAAAGAGTACCGAGGATTATGGGTATGTCTACAGAAAAGATCGATTACTCCCTTTACGCTTTCGGGATGCCAGAGAG
CCGCAAAGTAACAACGGACA

Downstream 100 bases:

>100_bases
GCACAAAAAAAACCAACCCGGTGTTTCAGAAGGCAAAGCTGAAGGCGGAATCGCTCCTTAATGATCCAGAAAAGACAAAA
AAGCTCATTCAGGCCGCCTT

Product: rhomboid family protein

Products: NA

Alternate protein names: Peptidase; Transmembrane Rhomboid Family Protein; Rhomboid-Like Protein; Integral Membrane Protein; Cytoplasmic Membrane Protein; Rhomboid Protein; Rhomboid Family Protein/GlpG-Like Protein; Peptidase Protein; Membrane Serine Protease; GlpG Protein; S54 Family Peptidase; Serine Protease; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNNNSQPYSPGGFQVIPPAIKLIILANVAIFLFQTSGLGAFITAYGALWPINSHNDTGLSFQIWQPVTYMFLHGSMGHLF
FNMFALWIFGTEIENYWGTRQFTIYYFICGIGAALINLLTTIGDPYSTVGASGAIYGILLAFGMMFPERYIYLYFLLPVK
AKYFVAGYAFLEFISGLGSRTMGSGSNIAHFAHLGGMLVGFIYITLKRQEWSLSRFISKARPALPKKKSAAIHNISSGTT
KPSEEEIDAILDKISRNGYESLTGQERQKLLKAGGKES

Sequences:

>Translated_278_residues
MNNNSQPYSPGGFQVIPPAIKLIILANVAIFLFQTSGLGAFITAYGALWPINSHNDTGLSFQIWQPVTYMFLHGSMGHLF
FNMFALWIFGTEIENYWGTRQFTIYYFICGIGAALINLLTTIGDPYSTVGASGAIYGILLAFGMMFPERYIYLYFLLPVK
AKYFVAGYAFLEFISGLGSRTMGSGSNIAHFAHLGGMLVGFIYITLKRQEWSLSRFISKARPALPKKKSAAIHNISSGTT
KPSEEEIDAILDKISRNGYESLTGQERQKLLKAGGKES
>Mature_278_residues
MNNNSQPYSPGGFQVIPPAIKLIILANVAIFLFQTSGLGAFITAYGALWPINSHNDTGLSFQIWQPVTYMFLHGSMGHLF
FNMFALWIFGTEIENYWGTRQFTIYYFICGIGAALINLLTTIGDPYSTVGASGAIYGILLAFGMMFPERYIYLYFLLPVK
AKYFVAGYAFLEFISGLGSRTMGSGSNIAHFAHLGGMLVGFIYITLKRQEWSLSRFISKARPALPKKKSAAIHNISSGTT
KPSEEEIDAILDKISRNGYESLTGQERQKLLKAGGKES

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321538, Length=158, Percent_Identity=31.6455696202532, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30757; Mature: 30757

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNSQPYSPGGFQVIPPAIKLIILANVAIFLFQTSGLGAFITAYGALWPINSHNDTGLS
CCCCCCCCCCCCCEECHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCCE
FQIWQPVTYMFLHGSMGHLFFNMFALWIFGTEIENYWGTRQFTIYYFICGIGAALINLLT
EEECCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH
TIGDPYSTVGASGAIYGILLAFGMMFPERYIYLYFLLPVKAKYFVAGYAFLEFISGLGSR
HCCCCHHHHCCCHHHHHHHHHHHHHCCHHHEEEEEEEHHHHHHHHHHHHHHHHHHCCCCC
TMGSGSNIAHFAHLGGMLVGFIYITLKRQEWSLSRFISKARPALPKKKSAAIHNISSGTT
CCCCCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC
KPSEEEIDAILDKISRNGYESLTGQERQKLLKAGGKES
CCCHHHHHHHHHHHHCCCCHHCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNNNSQPYSPGGFQVIPPAIKLIILANVAIFLFQTSGLGAFITAYGALWPINSHNDTGLS
CCCCCCCCCCCCCEECHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCCE
FQIWQPVTYMFLHGSMGHLFFNMFALWIFGTEIENYWGTRQFTIYYFICGIGAALINLLT
EEECCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH
TIGDPYSTVGASGAIYGILLAFGMMFPERYIYLYFLLPVKAKYFVAGYAFLEFISGLGSR
HCCCCHHHHCCCHHHHHHHHHHHHHCCHHHEEEEEEEHHHHHHHHHHHHHHHHHHCCCCC
TMGSGSNIAHFAHLGGMLVGFIYITLKRQEWSLSRFISKARPALPKKKSAAIHNISSGTT
CCCCCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC
KPSEEEIDAILDKISRNGYESLTGQERQKLLKAGGKES
CCCHHHHHHHHHHHHCCCCHHCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA