| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358500
Identifier: 119358500
GI number: 119358500
Start: 3127286
End: 3127732
Strand: Direct
Name: 119358500
Synonym: Cpha266_2736
Alternate gene names: NA
Gene position: 3127286-3127732 (Clockwise)
Preceding gene: 119358499
Following gene: NA
Centisome position: 99.79
GC content: 47.43
Gene sequence:
>447_bases ATGAGCACAAAAAAAACCAACCCGGTGTTTCAGAAGGCAAAGCTGAAGGCGGAATCGCTCCTTAATGATCCAGAAAAGAC AAAAAAGCTCATTCAGGCCGCCTTCAACAAAGCTGATTCCGGAAAATACGCATCATCTTTCCGCGCCGTTACCGGAAAGC TCAATGCCCTGGGAAGAATGGTTCGGTGCTACGTCAAAAAAGAGTATCGCGATATTTCGCTCCAAACCATTGTTCTGGCA ACCGCGGCGCTGATATACTTTGTCTGGCCTCTTGACGTGATGGCCGACATTATTCCTCTTTTGGGCTTTGCGGACGACGC GGCAATCATTTTGGCCGTCTTTTCATCTATCAGTCAGGATATAGAAAAATTTCTTGCCTGGGAGAGTTCAAAAGAGAGCG GTGCTGAAGTTATTGAGTATACAGAAATCGACCCCCCCACACCCTGA
Upstream 100 bases:
>100_bases AGGAAATCGACGCCATTCTTGACAAGATCTCGCGTAACGGTTATGAATCATTAACCGGGCAGGAACGACAAAAACTGCTC AAAGCGGGGGGCAAAGAGTC
Downstream 100 bases:
>100_bases TCACTCGCGCTCAAAACAGGCAACGCTTTCAATGTGGCTGGTATGCGGAAACATATCAACCGGTTGGAGCGATGTGAGCC GGTATCCCCCCTTGCATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSTKKTNPVFQKAKLKAESLLNDPEKTKKLIQAAFNKADSGKYASSFRAVTGKLNALGRMVRCYVKKEYRDISLQTIVLA TAALIYFVWPLDVMADIIPLLGFADDAAIILAVFSSISQDIEKFLAWESSKESGAEVIEYTEIDPPTP
Sequences:
>Translated_148_residues MSTKKTNPVFQKAKLKAESLLNDPEKTKKLIQAAFNKADSGKYASSFRAVTGKLNALGRMVRCYVKKEYRDISLQTIVLA TAALIYFVWPLDVMADIIPLLGFADDAAIILAVFSSISQDIEKFLAWESSKESGAEVIEYTEIDPPTP >Mature_147_residues STKKTNPVFQKAKLKAESLLNDPEKTKKLIQAAFNKADSGKYASSFRAVTGKLNALGRMVRCYVKKEYRDISLQTIVLAT AALIYFVWPLDVMADIIPLLGFADDAAIILAVFSSISQDIEKFLAWESSKESGAEVIEYTEIDPPTP
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16380; Mature: 16249
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKKTNPVFQKAKLKAESLLNDPEKTKKLIQAAFNKADSGKYASSFRAVTGKLNALGRM CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VRCYVKKEYRDISLQTIVLATAALIYFVWPLDVMADIIPLLGFADDAAIILAVFSSISQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IEKFLAWESSKESGAEVIEYTEIDPPTP HHHHHHCCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure STKKTNPVFQKAKLKAESLLNDPEKTKKLIQAAFNKADSGKYASSFRAVTGKLNALGRM CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VRCYVKKEYRDISLQTIVLATAALIYFVWPLDVMADIIPLLGFADDAAIILAVFSSISQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IEKFLAWESSKESGAEVIEYTEIDPPTP HHHHHHCCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA