| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358492
Identifier: 119358492
GI number: 119358492
Start: 3120848
End: 3121336
Strand: Reverse
Name: 119358492
Synonym: Cpha266_2728
Alternate gene names: NA
Gene position: 3121336-3120848 (Counterclockwise)
Preceding gene: 119358493
Following gene: 119358491
Centisome position: 99.6
GC content: 47.65
Gene sequence:
>489_bases ATGCAGAGTGACAAGGATAAACGATTTTCTCTCTCGCAGTTTACCGGAATCCTGAAAACAGGATGGCAGGGGAAAAGTGA TGAAAAAACGCCACAGGGCAACTCCCCTTCCGATCGCTTTCACGATGGAGGCGTGGAGCCTGAGCTCGAGATCATGAACG ATGTGCCGCCTGCGCAGGAGAGTTTGCGCAAGTCGACAAAAAGAAGTTTCGGATTTGATATAGGAGATGTTCTGCAATTG CGGACATTTTTCTATCTCTTTGTCATAACGGTAATTTTTCTGTTTCAGACACACAATACCATAGCCATAAAAAATCTCGC CATGCAGAATGAGATACTCAGAGAGCAACTGCAGATGAGCGCAAGCGTGATAACGGCTCAGGAGCTCAAGGCGAGTGAAT TGCAGAGTATTCACAATATCACGGAATGCACGGGAGCTCTTGGTCTGCAGGCCTCTTCAGTTCCTGCCGTTGAGCTTGCT GTTCCATGA
Upstream 100 bases:
>100_bases CGAAAGCCGCTCATCGCCGATGAAAAGGAAATTCAGGAAAATCCAAGAGCGCGCAGCGCGAAATTGCGTGTTGTTGAGAA CGTGGCAACAGGGGGCTCCC
Downstream 100 bases:
>100_bases ACTTTCAACGGATTGAAAAGGATTCGGCCATGAATGACAATCTGTCGCATACGGAGACCGGCGATAAGCGATTCGGACAA CGTCTCGGATTTGTTGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MQSDKDKRFSLSQFTGILKTGWQGKSDEKTPQGNSPSDRFHDGGVEPELEIMNDVPPAQESLRKSTKRSFGFDIGDVLQL RTFFYLFVITVIFLFQTHNTIAIKNLAMQNEILREQLQMSASVITAQELKASELQSIHNITECTGALGLQASSVPAVELA VP
Sequences:
>Translated_162_residues MQSDKDKRFSLSQFTGILKTGWQGKSDEKTPQGNSPSDRFHDGGVEPELEIMNDVPPAQESLRKSTKRSFGFDIGDVLQL RTFFYLFVITVIFLFQTHNTIAIKNLAMQNEILREQLQMSASVITAQELKASELQSIHNITECTGALGLQASSVPAVELA VP >Mature_162_residues MQSDKDKRFSLSQFTGILKTGWQGKSDEKTPQGNSPSDRFHDGGVEPELEIMNDVPPAQESLRKSTKRSFGFDIGDVLQL RTFFYLFVITVIFLFQTHNTIAIKNLAMQNEILREQLQMSASVITAQELKASELQSIHNITECTGALGLQASSVPAVELA VP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17988; Mature: 17988
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSDKDKRFSLSQFTGILKTGWQGKSDEKTPQGNSPSDRFHDGGVEPELEIMNDVPPAQE CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHH SLRKSTKRSFGFDIGDVLQLRTFFYLFVITVIFLFQTHNTIAIKNLAMQNEILREQLQMS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ASVITAQELKASELQSIHNITECTGALGLQASSVPAVELAVP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure MQSDKDKRFSLSQFTGILKTGWQGKSDEKTPQGNSPSDRFHDGGVEPELEIMNDVPPAQE CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHH SLRKSTKRSFGFDIGDVLQLRTFFYLFVITVIFLFQTHNTIAIKNLAMQNEILREQLQMS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ASVITAQELKASELQSIHNITECTGALGLQASSVPAVELAVP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA