| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358455
Identifier: 119358455
GI number: 119358455
Start: 3085391
End: 3085918
Strand: Reverse
Name: 119358455
Synonym: Cpha266_2691
Alternate gene names: NA
Gene position: 3085918-3085391 (Counterclockwise)
Preceding gene: 119358456
Following gene: 119358454
Centisome position: 98.47
GC content: 50.76
Gene sequence:
>528_bases ATGGCAAGTGTCGGTCGTGAATTACTCGATGTCCCATTACCGGAAATGGTAATGAAGCTTGGCCTCGGCATTGCGGAGGC TCAGAGGGCTCTTGACCAGAACTCGGTTGAAACAGCAAAAATGCTGGCGGAAACAGAGGTTGATCTGATTCTCGGCATGA GTCAGGAGATAACGGATAACGGCGTGACGTTTAAATCGACGCCTCCCGTTAAAGTATCGCTTCTGCAGATAGGTCTTTTG CCGACCTTTTATCAGTTTTCCGAAGCGACGATTGAGGTTACCATGGATATCAAGACAACCATGTCGACCGAGACCAATAT AAAAGTAAGCGCAAGCGCCAAGGTCGGTTTTGCCTGCTGGAGCGCAACGGTCAATACGGATGTCTCCCATAATCGTAAAT TCGGCAAAGAGGTTCACGGCACGAGCCGACTGATGACAAAAATGGTTCCGGTTCCTCCCCCTGCACGTATCGCGCCAGAA ATCATCGTTACGGACAAGAGGACACCGGCCCCAACCCCAACCCCATAA
Upstream 100 bases:
>100_bases ATCCGGTTATCAATACGCTTTTGTAATTTATTTTTCACGTGCTCATATTCCTGAACCCGTTGTCACATCTCAAGGGCAAC ACAAAAAAGGAGATAATCCT
Downstream 100 bases:
>100_bases CCATGCAATGGAGGAGATAATCATTGTCACCAACTATTCGAGAACCGCTCTTTTCGCCTGCACTCAAGGTTAAAGAGACC GAGCAGGCGTCGTTTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MASVGRELLDVPLPEMVMKLGLGIAEAQRALDQNSVETAKMLAETEVDLILGMSQEITDNGVTFKSTPPVKVSLLQIGLL PTFYQFSEATIEVTMDIKTTMSTETNIKVSASAKVGFACWSATVNTDVSHNRKFGKEVHGTSRLMTKMVPVPPPARIAPE IIVTDKRTPAPTPTP
Sequences:
>Translated_175_residues MASVGRELLDVPLPEMVMKLGLGIAEAQRALDQNSVETAKMLAETEVDLILGMSQEITDNGVTFKSTPPVKVSLLQIGLL PTFYQFSEATIEVTMDIKTTMSTETNIKVSASAKVGFACWSATVNTDVSHNRKFGKEVHGTSRLMTKMVPVPPPARIAPE IIVTDKRTPAPTPTP >Mature_174_residues ASVGRELLDVPLPEMVMKLGLGIAEAQRALDQNSVETAKMLAETEVDLILGMSQEITDNGVTFKSTPPVKVSLLQIGLLP TFYQFSEATIEVTMDIKTTMSTETNIKVSASAKVGFACWSATVNTDVSHNRKFGKEVHGTSRLMTKMVPVPPPARIAPEI IVTDKRTPAPTPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18911; Mature: 18780
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVGRELLDVPLPEMVMKLGLGIAEAQRALDQNSVETAKMLAETEVDLILGMSQEITDN CCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCHHCCC GVTFKSTPPVKVSLLQIGLLPTFYQFSEATIEVTMDIKTTMSTETNIKVSASAKVGFACW CEEECCCCCCEEEEEECCCCHHHHHCCCEEEEEEEEEEEEECCCCCEEEEECCCEEEEEE SATVNTDVSHNRKFGKEVHGTSRLMTKMVPVPPPARIAPEIIVTDKRTPAPTPTP ECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure ASVGRELLDVPLPEMVMKLGLGIAEAQRALDQNSVETAKMLAETEVDLILGMSQEITDN CCCCHHHHHCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCHHCCC GVTFKSTPPVKVSLLQIGLLPTFYQFSEATIEVTMDIKTTMSTETNIKVSASAKVGFACW CEEECCCCCCEEEEEECCCCHHHHHCCCEEEEEEEEEEEEECCCCCEEEEECCCEEEEEE SATVNTDVSHNRKFGKEVHGTSRLMTKMVPVPPPARIAPEIIVTDKRTPAPTPTP ECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA