| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358454
Identifier: 119358454
GI number: 119358454
Start: 3084852
End: 3085367
Strand: Reverse
Name: 119358454
Synonym: Cpha266_2690
Alternate gene names: NA
Gene position: 3085367-3084852 (Counterclockwise)
Preceding gene: 119358455
Following gene: 119358453
Centisome position: 98.45
GC content: 50.97
Gene sequence:
>516_bases TTGTCACCAACTATTCGAGAACCGCTCTTTTCGCCTGCACTCAAGGTTAAAGAGACCGAGCAGGCGTCGTTTGCCGATCT TATCCGGCTTGTAGCAGAAAGTGTGGCCGATGCGCAAGCGGCACTTGACCGTTCTTCGGCAAGCCTGCTCAGGGAGCTTG CCGAGACGCCGGTTGAAATAATTCCAAGCATCACCGAAACGATTTCACAAGGAGGCGAGGTAACCTATAAGCACGGAAAA CCTCGAACGGTATCGCTGCTTGATTTGGGGGTAATGCCTACTTTTTATCAGTTTTCGCAGACCGTGATTGAAATACAGAT GGATCTGAAAATCACCGAAGCGACAACCGAGTCAGGGACGAGAAAAGGGCTTGTTTTGCTTGCCGACACTTCGGCAATCC GCTTTGAGCGCAAGCTTGACCGGGATATGAAAATCGTCTCGAAAATAACGGCAACCCTTGTTCCGGTACCGATGCCGCTG CGCATTGAGCCTGTTCGCTCGACTGAAAACGCATAA
Upstream 100 bases:
>100_bases TTCCTCCCCCTGCACGTATCGCGCCAGAAATCATCGTTACGGACAAGAGGACACCGGCCCCAACCCCAACCCCATAACCA TGCAATGGAGGAGATAATCA
Downstream 100 bases:
>100_bases CCGTAAAAAGAAGGTTGCTGAACTGCTGCGGCGACCTTCTTTTTCATTTTTTTACAGGAGAACCAATGAGCGCAGAGGAA ATTAATTTTAACGCTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSPTIREPLFSPALKVKETEQASFADLIRLVAESVADAQAALDRSSASLLRELAETPVEIIPSITETISQGGEVTYKHGK PRTVSLLDLGVMPTFYQFSQTVIEIQMDLKITEATTESGTRKGLVLLADTSAIRFERKLDRDMKIVSKITATLVPVPMPL RIEPVRSTENA
Sequences:
>Translated_171_residues MSPTIREPLFSPALKVKETEQASFADLIRLVAESVADAQAALDRSSASLLRELAETPVEIIPSITETISQGGEVTYKHGK PRTVSLLDLGVMPTFYQFSQTVIEIQMDLKITEATTESGTRKGLVLLADTSAIRFERKLDRDMKIVSKITATLVPVPMPL RIEPVRSTENA >Mature_170_residues SPTIREPLFSPALKVKETEQASFADLIRLVAESVADAQAALDRSSASLLRELAETPVEIIPSITETISQGGEVTYKHGKP RTVSLLDLGVMPTFYQFSQTVIEIQMDLKITEATTESGTRKGLVLLADTSAIRFERKLDRDMKIVSKITATLVPVPMPLR IEPVRSTENA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18784; Mature: 18653
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTIREPLFSPALKVKETEQASFADLIRLVAESVADAQAALDRSSASLLRELAETPVEI CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH IPSITETISQGGEVTYKHGKPRTVSLLDLGVMPTFYQFSQTVIEIQMDLKITEATTESGT HHHHHHHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHEEEEECEEEEECCCCCCC RKGLVLLADTSAIRFERKLDRDMKIVSKITATLVPVPMPLRIEPVRSTENA CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC >Mature Secondary Structure SPTIREPLFSPALKVKETEQASFADLIRLVAESVADAQAALDRSSASLLRELAETPVEI CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH IPSITETISQGGEVTYKHGKPRTVSLLDLGVMPTFYQFSQTVIEIQMDLKITEATTESGT HHHHHHHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHEEEEECEEEEECCCCCCC RKGLVLLADTSAIRFERKLDRDMKIVSKITATLVPVPMPLRIEPVRSTENA CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA