| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is thrC [H]
Identifier: 119358314
GI number: 119358314
Start: 2924140
End: 2925456
Strand: Direct
Name: thrC [H]
Synonym: Cpha266_2546
Alternate gene names: 119358314
Gene position: 2924140-2925456 (Clockwise)
Preceding gene: 119358313
Following gene: 119358315
Centisome position: 93.31
GC content: 52.09
Gene sequence:
>1317_bases ATGATCTATTTCAGCACCAATAAATCATCCACCCCCGTTTCGATAAAAAAAGCGACCCTTGAAGGGCTTGCTCCCGACGG CGGGCTCTATGTTCCCTCTGAAATACCGAAATTTTCAGCGCAGGAGCTTGCCCTGCTTGAAGACGCAAGCTTCTGCAATA TCGCTCTTGCGATAGCAAAAAAATTTATCGGAGGAGCAATCCCTCCCGATCAGCTCAGCGACATGATTGAAAGCTGTTAC CCTTTCGATACGCCGCTTGTCGAGCTCGAACAAAACACCTTTATCGAAGAACTTTTCTGTGGACCCACCCTGGCATTCAA AGACTACGGCGCACGTTTTCTTGCCCGGCTCACCGGCTGGTTTGCCGCAGAAGACGACAGGCTGATCACCGTGCTTGTCG CAACGTCAGGAGACACAGGCAGCGCCGTAGCCTACGGATTTCAGGGAATTGCGAACACACGGGTCGTGCTCCTCTACCCC TCGGGAAAAGTAAGCCGACTGCAGGAACAACAGCTCACCACTGCAGGAAACAATGTCGAAGCGCTTGAAGTAAAAGGCGA TTTCGACGACTGCCAGCGACTGGTCAAACAGGCATTTGTCGATCCCGCTCTCAAAGAGAGGCTCACCTTGACCTCGGCAA ACTCGATCAACATATCAAGACTGATCCCCCAATCATTTTACTATGCCTGGGCGGCCATGCAACTGAAAACCGGATACGGG TTGACCCATCCGGTATTCTCGGTGCCGAGCGGCAACTACGGAAACATCACGGCCGGCGTGCTTGCAAAGCTCATGGGTTT CCCTGTCGGCCATTTCGTAGCCGCATCAAATGCAAACGACAGCGTCACCCGATACCTCGAAGACGGAAGATATGAACCGC ACCCGACCATCACAACCATCTCAACGGCAATGGATGTAGGCGATCCGAGCAACTTCGCCCGCCTCAGATATCTCTACGGA AACGATTACCGGGCCATGAAAAAAGAGATAACGGGAGTAGCCATATCGGACAAGGCGACCAGAGAAACAATTATCAAGCT CCATAACGAGTTCGGCTATATTGCCGATCCCCATACCGCCGTCGGATTTCGCGCCCTTGAAGAGTACCGTAAAGCAAGCG GAAACCGTTCGGCAGGAGTGGTACTCTCAACAGCTCATCCGGCAAAGTTTCTCGAAGCCATAGAGGAGACACTCAATAAA AAAATCGCCATTCCCGATCGCCTGCAAGCCGTGCTCGAAAGAAAAAAACAGGCCACCCTCATCAACGCCAGCTATAACGA ACTGGCCGGGTTTCTGGAACATCTCGACAAGCATTAA
Upstream 100 bases:
>100_bases TCCTCCCTGAAACAAACCTCAAGTCAGATATGTGGGTATCACCGATCTGCAAGGAAGGCGCAAAAGTATTGTAACAAGTC ACTCTGCCCAGTTAACCAAC
Downstream 100 bases:
>100_bases ACCGTTGCACCGCCGCCATGAACTACAGAACCCTGCTCTTTTTTCTCATCCTGGTACCGATCATGATTATCGGGATGAGC CTCTCGCTGCTCATCAACCT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MIYFSTNKSSTPVSIKKATLEGLAPDGGLYVPSEIPKFSAQELALLEDASFCNIALAIAKKFIGGAIPPDQLSDMIESCY PFDTPLVELEQNTFIEELFCGPTLAFKDYGARFLARLTGWFAAEDDRLITVLVATSGDTGSAVAYGFQGIANTRVVLLYP SGKVSRLQEQQLTTAGNNVEALEVKGDFDDCQRLVKQAFVDPALKERLTLTSANSINISRLIPQSFYYAWAAMQLKTGYG LTHPVFSVPSGNYGNITAGVLAKLMGFPVGHFVAASNANDSVTRYLEDGRYEPHPTITTISTAMDVGDPSNFARLRYLYG NDYRAMKKEITGVAISDKATRETIIKLHNEFGYIADPHTAVGFRALEEYRKASGNRSAGVVLSTAHPAKFLEAIEETLNK KIAIPDRLQAVLERKKQATLINASYNELAGFLEHLDKH
Sequences:
>Translated_438_residues MIYFSTNKSSTPVSIKKATLEGLAPDGGLYVPSEIPKFSAQELALLEDASFCNIALAIAKKFIGGAIPPDQLSDMIESCY PFDTPLVELEQNTFIEELFCGPTLAFKDYGARFLARLTGWFAAEDDRLITVLVATSGDTGSAVAYGFQGIANTRVVLLYP SGKVSRLQEQQLTTAGNNVEALEVKGDFDDCQRLVKQAFVDPALKERLTLTSANSINISRLIPQSFYYAWAAMQLKTGYG LTHPVFSVPSGNYGNITAGVLAKLMGFPVGHFVAASNANDSVTRYLEDGRYEPHPTITTISTAMDVGDPSNFARLRYLYG NDYRAMKKEITGVAISDKATRETIIKLHNEFGYIADPHTAVGFRALEEYRKASGNRSAGVVLSTAHPAKFLEAIEETLNK KIAIPDRLQAVLERKKQATLINASYNELAGFLEHLDKH >Mature_438_residues MIYFSTNKSSTPVSIKKATLEGLAPDGGLYVPSEIPKFSAQELALLEDASFCNIALAIAKKFIGGAIPPDQLSDMIESCY PFDTPLVELEQNTFIEELFCGPTLAFKDYGARFLARLTGWFAAEDDRLITVLVATSGDTGSAVAYGFQGIANTRVVLLYP SGKVSRLQEQQLTTAGNNVEALEVKGDFDDCQRLVKQAFVDPALKERLTLTSANSINISRLIPQSFYYAWAAMQLKTGYG LTHPVFSVPSGNYGNITAGVLAKLMGFPVGHFVAASNANDSVTRYLEDGRYEPHPTITTISTAMDVGDPSNFARLRYLYG NDYRAMKKEITGVAISDKATRETIIKLHNEFGYIADPHTAVGFRALEEYRKASGNRSAGVVLSTAHPAKFLEAIEETLNK KIAIPDRLQAVLERKKQATLINASYNELAGFLEHLDKH
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=490, Percent_Identity=32.6530612244898, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI149193323, Length=430, Percent_Identity=29.7674418604651, Blast_Score=186, Evalue=4e-47, Organism=Escherichia coli, GI1786185, Length=408, Percent_Identity=43.1372549019608, Blast_Score=316, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6319901, Length=461, Percent_Identity=36.4425162689805, Blast_Score=249, Evalue=7e-67,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 47920; Mature: 47920
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYFSTNKSSTPVSIKKATLEGLAPDGGLYVPSEIPKFSAQELALLEDASFCNIALAIAK CEEEECCCCCCCEEEEHHHHHCCCCCCCEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHH KFIGGAIPPDQLSDMIESCYPFDTPLVELEQNTFIEELFCGPTLAFKDYGARFLARLTGW HHHCCCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FAAEDDRLITVLVATSGDTGSAVAYGFQGIANTRVVLLYPSGKVSRLQEQQLTTAGNNVE HCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEE ALEVKGDFDDCQRLVKQAFVDPALKERLTLTSANSINISRLIPQSFYYAWAAMQLKTGYG EEEEECCHHHHHHHHHHHHCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCC LTHPVFSVPSGNYGNITAGVLAKLMGFPVGHFVAASNANDSVTRYLEDGRYEPHPTITTI CCCCEEECCCCCCCCCHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHCCCCCCCCCEEEE STAMDVGDPSNFARLRYLYGNDYRAMKKEITGVAISDKATRETIIKLHNEFGYIADPHTA EHHHCCCCCCCCEEEEEEECCCHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCCCHH VGFRALEEYRKASGNRSAGVVLSTAHPAKFLEAIEETLNKKIAIPDRLQAVLERKKQATL HHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEE INASYNELAGFLEHLDKH EECCHHHHHHHHHHHCCC >Mature Secondary Structure MIYFSTNKSSTPVSIKKATLEGLAPDGGLYVPSEIPKFSAQELALLEDASFCNIALAIAK CEEEECCCCCCCEEEEHHHHHCCCCCCCEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHH KFIGGAIPPDQLSDMIESCYPFDTPLVELEQNTFIEELFCGPTLAFKDYGARFLARLTGW HHHCCCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FAAEDDRLITVLVATSGDTGSAVAYGFQGIANTRVVLLYPSGKVSRLQEQQLTTAGNNVE HCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEE ALEVKGDFDDCQRLVKQAFVDPALKERLTLTSANSINISRLIPQSFYYAWAAMQLKTGYG EEEEECCHHHHHHHHHHHHCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCC LTHPVFSVPSGNYGNITAGVLAKLMGFPVGHFVAASNANDSVTRYLEDGRYEPHPTITTI CCCCEEECCCCCCCCCHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHCCCCCCCCCEEEE STAMDVGDPSNFARLRYLYGNDYRAMKKEITGVAISDKATRETIIKLHNEFGYIADPHTA EHHHCCCCCCCCEEEEEEECCCHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCCCHH VGFRALEEYRKASGNRSAGVVLSTAHPAKFLEAIEETLNKKIAIPDRLQAVLERKKQATL HHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEE INASYNELAGFLEHLDKH EECCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8423151 [H]