| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358134
Identifier: 119358134
GI number: 119358134
Start: 2751273
End: 2752169
Strand: Reverse
Name: 119358134
Synonym: Cpha266_2366
Alternate gene names: NA
Gene position: 2752169-2751273 (Counterclockwise)
Preceding gene: 119358135
Following gene: 119358133
Centisome position: 87.82
GC content: 48.49
Gene sequence:
>897_bases ATGCACGAAGAGAGTTCGTATCGTTCTTCACTGGACTTAATAGCCGGTGATCTGAAAAAAGCCCGTATGCAAAAAAACCT CTCACTTGAAGAGGTCAGCAGATCTGCAGGGATAAACAAAAGCCATTTTGAAAAGATCGAAGCCGGTGATTTTGGATTTC TTCCGAAAATCTATGTGTTTGCAACGCTCAAGTCATATGCGCGGGAGTTGGGCGTAGGTGATGATGCACTTCTTGAACAG TGTCGCAAGGAGTTGCAGATGCCGCTTATTGGTGAATCCGACAATAAAAGCAGCGTTGGTGAACATGTGCGCGTTCAGGA GATGCAGAAAAAGAGATCGCAAAATGAGTTTTCATTCTTTTCATGGCTTGGGGGTCTTGTTGCTTCACGCGGTATTGCCG TTCTGATGGTCGCGCTCGCCATACTTCTCGCTCTTTTTTTTATCCGAAAGCCTTCCTCTTCACCCCCTCCCATGATCGAG CCTGTAGTACAGACGCCGGTAATGTTGCCTCAATCATCCGATAGCGCAGTTGTCGATACGCTCTCCGGTTTGTCAGATAT TCCGAGTGAGCCGAAGGAAGATGTTCCTTCCGAAACGCCTGTCGCGCCCTCTCCGGCGAAGGCTCTTTCGACGGACTCCC TTTCTTCCGCACATGCGTCAGCACCCGCTCGTCAACGTCTTGTTGTGCGTATTATTTCCGATACATCCTGGGTCAAGGTT ATTGCGGATGACAGCGCTAAAGTCTATCCCGGCGGTCGCTTCCCGTCAGGAACGGTGCTTCATTATGAAGGCAAAAAAAA ATTATGGGTCAGCATTGGTCGTCCTGTTAATGTCGAGCTGACGCTGAACGGCAAAAAAATTCCTCCATTTACCGAGCGTA CGCTTGTTTTTGAATAA
Upstream 100 bases:
>100_bases ATGCTTATAACGGTTTCTGTTATATAGGATTATTATTACAGCTCCTATATATTTGAATTTTACAGGCTGATTTTATTTCA CAGCAATTCAAGCTGCATCC
Downstream 100 bases:
>100_bases GGTTTACCCTCGCGCTGCCATTTTTCGGGGATGATTTTTTTCGTTTCAGAAATAGGATAAAAAAAGTCCTAAATAAGGGA ATTAATAGCTCTTTTTGATC
Product: helix-turn-helix domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MHEESSYRSSLDLIAGDLKKARMQKNLSLEEVSRSAGINKSHFEKIEAGDFGFLPKIYVFATLKSYARELGVGDDALLEQ CRKELQMPLIGESDNKSSVGEHVRVQEMQKKRSQNEFSFFSWLGGLVASRGIAVLMVALAILLALFFIRKPSSSPPPMIE PVVQTPVMLPQSSDSAVVDTLSGLSDIPSEPKEDVPSETPVAPSPAKALSTDSLSSAHASAPARQRLVVRIISDTSWVKV IADDSAKVYPGGRFPSGTVLHYEGKKKLWVSIGRPVNVELTLNGKKIPPFTERTLVFE
Sequences:
>Translated_298_residues MHEESSYRSSLDLIAGDLKKARMQKNLSLEEVSRSAGINKSHFEKIEAGDFGFLPKIYVFATLKSYARELGVGDDALLEQ CRKELQMPLIGESDNKSSVGEHVRVQEMQKKRSQNEFSFFSWLGGLVASRGIAVLMVALAILLALFFIRKPSSSPPPMIE PVVQTPVMLPQSSDSAVVDTLSGLSDIPSEPKEDVPSETPVAPSPAKALSTDSLSSAHASAPARQRLVVRIISDTSWVKV IADDSAKVYPGGRFPSGTVLHYEGKKKLWVSIGRPVNVELTLNGKKIPPFTERTLVFE >Mature_298_residues MHEESSYRSSLDLIAGDLKKARMQKNLSLEEVSRSAGINKSHFEKIEAGDFGFLPKIYVFATLKSYARELGVGDDALLEQ CRKELQMPLIGESDNKSSVGEHVRVQEMQKKRSQNEFSFFSWLGGLVASRGIAVLMVALAILLALFFIRKPSSSPPPMIE PVVQTPVMLPQSSDSAVVDTLSGLSDIPSEPKEDVPSETPVAPSPAKALSTDSLSSAHASAPARQRLVVRIISDTSWVKV IADDSAKVYPGGRFPSGTVLHYEGKKKLWVSIGRPVNVELTLNGKKIPPFTERTLVFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32594; Mature: 32594
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEESSYRSSLDLIAGDLKKARMQKNLSLEEVSRSAGINKSHFEKIEAGDFGFLPKIYVF CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH ATLKSYARELGVGDDALLEQCRKELQMPLIGESDNKSSVGEHVRVQEMQKKRSQNEFSFF HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH SWLGGLVASRGIAVLMVALAILLALFFIRKPSSSPPPMIEPVVQTPVMLPQSSDSAVVDT HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEECCCCCCHHHHHH LSGLSDIPSEPKEDVPSETPVAPSPAKALSTDSLSSAHASAPARQRLVVRIISDTSWVKV HHHHHCCCCCCHHCCCCCCCCCCCCHHHHCCCCHHHHHHCCCHHHHHEEHEECCCCEEEE IADDSAKVYPGGRFPSGTVLHYEGKKKLWVSIGRPVNVELTLNGKKIPPFTERTLVFE EECCCCEECCCCCCCCCCEEEECCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEECC >Mature Secondary Structure MHEESSYRSSLDLIAGDLKKARMQKNLSLEEVSRSAGINKSHFEKIEAGDFGFLPKIYVF CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH ATLKSYARELGVGDDALLEQCRKELQMPLIGESDNKSSVGEHVRVQEMQKKRSQNEFSFF HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH SWLGGLVASRGIAVLMVALAILLALFFIRKPSSSPPPMIEPVVQTPVMLPQSSDSAVVDT HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEECCCCCCHHHHHH LSGLSDIPSEPKEDVPSETPVAPSPAKALSTDSLSSAHASAPARQRLVVRIISDTSWVKV HHHHHCCCCCCHHCCCCCCCCCCCCHHHHCCCCHHHHHHCCCHHHHHEEHEECCCCEEEE IADDSAKVYPGGRFPSGTVLHYEGKKKLWVSIGRPVNVELTLNGKKIPPFTERTLVFE EECCCCEECCCCCCCCCCEEEECCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA