BacMap

Definition	Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession	NC_008639
Length	3,133,902

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The map label for this gene is fabG [H]

Identifier: 119358133

GI number: 119358133

Start: 2750406

End: 2751110

Strand: Reverse

Name: fabG [H]

Synonym: Cpha266_2365

Alternate gene names: 119358133

Gene position: 2751110-2750406 (Counterclockwise)

Preceding gene: 119358134

Following gene: 119358132

Centisome position: 87.79

GC content: 52.2

Gene sequence:

>705_bases
ATGGATTTATTCAGTGACAGGGTAGTGGTGATTACCGGATCGTCGGGAAATCTTGGAAGGGTTGTCGCCGATGCGTTTTA
TCATGCTGGAGCGGCGCTTGCCCTTGTGGATCTCAACCATAACTCTTGCGACGAAGAGTCCGTTGATTCAGGCAGGAAGT
TCCGGGTTGCCGGCGATCTTCTCAGTTCAGTTGAGGCTGATGCGGTTATTGAAAAAATAATAAAGCATTATGGTCGGATC
GATGTACTTGTAAATATTGCCGGCGGGTTTGTTGCGGGAGCGCCTGTTCATGAAACATCTCGCGAAAGCTGGGAGTACAT
GCTCAACCTCAATGCCGGAACGGCATTCAATACTGCGCGGGCAGTCGTTTCAGGTATGAGGGCTCAGGGACGGGGATGGA
TTATCAATACGTCCGCACGGGCCGCATTGGCGGGTAAAGCGGGAATGGCAGCCTATGTCGCTTCGAAATCGGCAGTAATA
CGTCTTACCGAAACGCTTGCGGAAGAGAATAAACGGGAGGGCCTCAACGTGAACTGCGTGTTGCCGGGCATTCTCGACAC
CCCCTTGAACAGGTTATCTATGCCCCAGGCCGATTTCAGTTCATGGGTTTCTCCCGAAGCGCTTGCGGATGTCGTTCTCT
TTCTTGCTTCAGATGCGTCAAGGGCTATCAACGGGGCTTCCATTCCTGTGTATGGAACAGGGTGA

Upstream 100 bases:

>100_bases
AAAGTCCTAAATAAGGGAATTAATAGCTCTTTTTGATCATTCGTTTATGCATGATTCAGGATAATGTTTATTCTGAATAC
TAAAACATGAACTATAGGCA

Downstream 100 bases:

>100_bases
TAGAGGCTATGACGTGTTGTTCCAAAAAAAGTTTATTTGCATTATTCGTTTTTCATAACCAGAAAATTCAGGTCGAGGAA
GCATGAAAATATATGATTCC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDLFSDRVVVITGSSGNLGRVVADAFYHAGAALALVDLNHNSCDEESVDSGRKFRVAGDLLSSVEADAVIEKIIKHYGRI
DVLVNIAGGFVAGAPVHETSRESWEYMLNLNAGTAFNTARAVVSGMRAQGRGWIINTSARAALAGKAGMAAYVASKSAVI
RLTETLAEENKREGLNVNCVLPGILDTPLNRLSMPQADFSSWVSPEALADVVLFLASDASRAINGASIPVYGTG

Sequences:

>Translated_234_residues
MDLFSDRVVVITGSSGNLGRVVADAFYHAGAALALVDLNHNSCDEESVDSGRKFRVAGDLLSSVEADAVIEKIIKHYGRI
DVLVNIAGGFVAGAPVHETSRESWEYMLNLNAGTAFNTARAVVSGMRAQGRGWIINTSARAALAGKAGMAAYVASKSAVI
RLTETLAEENKREGLNVNCVLPGILDTPLNRLSMPQADFSSWVSPEALADVVLFLASDASRAINGASIPVYGTG
>Mature_234_residues
MDLFSDRVVVITGSSGNLGRVVADAFYHAGAALALVDLNHNSCDEESVDSGRKFRVAGDLLSSVEADAVIEKIIKHYGRI
DVLVNIAGGFVAGAPVHETSRESWEYMLNLNAGTAFNTARAVVSGMRAQGRGWIINTSARAALAGKAGMAAYVASKSAVI
RLTETLAEENKREGLNVNCVLPGILDTPLNRLSMPQADFSSWVSPEALADVVLFLASDASRAINGASIPVYGTG

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI66933014, Length=241, Percent_Identity=29.045643153527, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI15277342, Length=244, Percent_Identity=29.0983606557377, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI4504505, Length=235, Percent_Identity=28.936170212766, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=26.1224489795918, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI4758504, Length=201, Percent_Identity=31.8407960199005, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI208973246, Length=231, Percent_Identity=30.3030303030303, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI40254992, Length=187, Percent_Identity=29.4117647058824, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI31542939, Length=194, Percent_Identity=27.319587628866, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=27.2357723577236, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI10190704, Length=242, Percent_Identity=26.4462809917355, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI59889578, Length=165, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=25.390625, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4503817, Length=198, Percent_Identity=28.2828282828283, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI40807363, Length=190, Percent_Identity=28.4210526315789, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=27.8350515463918, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI83715985, Length=180, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224922801, Length=170, Percent_Identity=27.6470588235294, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1789208, Length=241, Percent_Identity=30.2904564315353, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1787526, Length=236, Percent_Identity=26.6949152542373, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787335, Length=240, Percent_Identity=27.9166666666667, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=28.7449392712551, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=28.8537549407115, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI87082100, Length=245, Percent_Identity=27.7551020408163, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=27.5720164609054, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787905, Length=241, Percent_Identity=26.9709543568465, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=27.710843373494, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789378, Length=237, Percent_Identity=25.7383966244726, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1787820, Length=179, Percent_Identity=25.1396648044693, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI2367365, Length=233, Percent_Identity=27.0386266094421, Blast_Score=61, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=28.9256198347107, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17538182, Length=195, Percent_Identity=33.8461538461538, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=29.1497975708502, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=23.8866396761134, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=24.2914979757085, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=27.3469387755102, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=195, Percent_Identity=31.7948717948718, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17568967, Length=226, Percent_Identity=26.5486725663717, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=257, Percent_Identity=28.0155642023346, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=27.6422764227642, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17564282, Length=190, Percent_Identity=29.4736842105263, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193203117, Length=217, Percent_Identity=26.2672811059908, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=215, Percent_Identity=26.046511627907, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=258, Percent_Identity=27.5193798449612, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=244, Percent_Identity=24.5901639344262, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=26.2548262548263, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=26.8199233716475, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17560150, Length=255, Percent_Identity=25.8823529411765, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=220, Percent_Identity=26.8181818181818, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562990, Length=244, Percent_Identity=25, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=27.1317829457364, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17562908, Length=241, Percent_Identity=26.1410788381743, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=258, Percent_Identity=26.7441860465116, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=236, Percent_Identity=33.4745762711864, Blast_Score=102, Evalue=4e-23,
Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=29.0836653386454, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24639444, Length=242, Percent_Identity=26.0330578512397, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=27.4900398406374, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24644337, Length=248, Percent_Identity=29.4354838709677, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17737361, Length=199, Percent_Identity=29.6482412060301, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=27.8225806451613, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI18859837, Length=238, Percent_Identity=30.672268907563, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=28.9795918367347, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI62472128, Length=231, Percent_Identity=27.7056277056277, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI17647337, Length=231, Percent_Identity=27.7056277056277, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI62472140, Length=231, Percent_Identity=27.7056277056277, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356301, Length=196, Percent_Identity=28.0612244897959, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 24624; Mature: 24624

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFSDRVVVITGSSGNLGRVVADAFYHAGAALALVDLNHNSCDEESVDSGRKFRVAGDL
CCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCEEEEHHHH
LSSVEADAVIEKIIKHYGRIDVLVNIAGGFVAGAPVHETSRESWEYMLNLNAGTAFNTAR
HHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHH
AVVSGMRAQGRGWIINTSARAALAGKAGMAAYVASKSAVIRLTETLAEENKREGLNVNCV
HHHHHHCCCCCCEEEECCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEE
LPGILDTPLNRLSMPQADFSSWVSPEALADVVLFLASDASRAINGASIPVYGTG
ECCHHHCCHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCCEEEECC
>Mature Secondary Structure
MDLFSDRVVVITGSSGNLGRVVADAFYHAGAALALVDLNHNSCDEESVDSGRKFRVAGDL
CCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCEEEEHHHH
LSSVEADAVIEKIIKHYGRIDVLVNIAGGFVAGAPVHETSRESWEYMLNLNAGTAFNTAR
HHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHH
AVVSGMRAQGRGWIINTSARAALAGKAGMAAYVASKSAVIRLTETLAEENKREGLNVNCV
HHHHHHCCCCCCEEEECCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEE
LPGILDTPLNRLSMPQADFSSWVSPEALADVVLFLASDASRAINGASIPVYGTG
ECCHHHCCHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]