| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is hsdM [C]
Identifier: 119358135
GI number: 119358135
Start: 2752400
End: 2753011
Strand: Reverse
Name: hsdM [C]
Synonym: Cpha266_2367
Alternate gene names: 119358135
Gene position: 2753011-2752400 (Counterclockwise)
Preceding gene: 119358137
Following gene: 119358134
Centisome position: 87.85
GC content: 51.47
Gene sequence:
>612_bases TTGCCGGAGCCGTTGAAATCATTAATCGTCAGCCTTCCCGGCGGAGTTTTCACAGCCGCCGGAGCAGGCGTCAAAACCAA CCACCTCTTCTTCTCCAAAGGTCAATCCACCAGAAAAATCTGGTACTACGACCTGAGCAGCATCAAAGTCGGCAAAAAAA CACCCCTGACCATCAAAACCTTCGAAGAGTTCTTTCGCCTCCTGCCGGAACGTCCCGATAGCGAACTCTCCTGGACCATC AACATGGATGAGCGCAAACAGAAAGCCGCAGAAGAAGCCTGCCCATTCAAGGAAAAAGCAACCGCCACCAGTCAGAAAGT CGCACAACTCAGCGAACGGCTGAAGGAGCTGAAGAAAACCTTTGCCCGGAAGAGCAAGGTCATCGAAGAGGCTGAAAAAA TGATAGCCGATCTCACCCGCGAAGCCAGAACCAACGCAGCCAAAGCCAAAGAGATCCAGGACGCCGTCTACGACCTCAAA GCTGTCAACCCCAACAAAAAAGCAGACACCGACAATCACACCCCCGAAGATCTTCTCGACATCATCGAAACCAAAGGCCG TGAAATCGCCGAAGCATTAGCCGTACTGAGAATCGGCTTATCGATATCATAA
Upstream 100 bases:
>100_bases TTATCCATGACCCTCAACGAAGCCGATACCAGGGCAAAGCTCATCGATCCGGCCATTCACAAACGAGGCTGGTCCGAAGA GTTCATCAAGCGCGAAGAGA
Downstream 100 bases:
>100_bases ATGAAACTCAAAAAAGGGCAATTCCGGTGGTAATTCGAAGCATTTATATGCCTTTTTTTGGTAACTTTTATGACTGTTAA TCAGTTCAATAACCGGCGGT
Product: hypothetical protein
Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]
Alternate protein names: Type I Restriction Endonuclease M Subunit; Site-Specific DNA-Methyltransferase
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPEPLKSLIVSLPGGVFTAAGAGVKTNHLFFSKGQSTRKIWYYDLSSIKVGKKTPLTIKTFEEFFRLLPERPDSELSWTI NMDERKQKAAEEACPFKEKATATSQKVAQLSERLKELKKTFARKSKVIEEAEKMIADLTREARTNAAKAKEIQDAVYDLK AVNPNKKADTDNHTPEDLLDIIETKGREIAEALAVLRIGLSIS
Sequences:
>Translated_203_residues MPEPLKSLIVSLPGGVFTAAGAGVKTNHLFFSKGQSTRKIWYYDLSSIKVGKKTPLTIKTFEEFFRLLPERPDSELSWTI NMDERKQKAAEEACPFKEKATATSQKVAQLSERLKELKKTFARKSKVIEEAEKMIADLTREARTNAAKAKEIQDAVYDLK AVNPNKKADTDNHTPEDLLDIIETKGREIAEALAVLRIGLSIS >Mature_202_residues PEPLKSLIVSLPGGVFTAAGAGVKTNHLFFSKGQSTRKIWYYDLSSIKVGKKTPLTIKTFEEFFRLLPERPDSELSWTIN MDERKQKAAEEACPFKEKATATSQKVAQLSERLKELKKTFARKSKVIEEAEKMIADLTREARTNAAKAKEIQDAVYDLKA VNPNKKADTDNHTPEDLLDIIETKGREIAEALAVLRIGLSIS
Specific function: The M And S Subunits Together Form A Methyltransferase (Mtase) That Methylates Two Adenine Residues In Complementary Strands Of A Bipartite DNA Recognition Sequence. In The Presence Of The R Subunit The Complex Can Also Act As An Endonuclease, Binding To
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.72 [C]
Molecular weight: Translated: 22709; Mature: 22578
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPLKSLIVSLPGGVFTAAGAGVKTNHLFFSKGQSTRKIWYYDLSSIKVGKKTPLTIKT CCHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCEECCCCCCCHHHH FEEFFRLLPERPDSELSWTINMDERKQKAAEEACPFKEKATATSQKVAQLSERLKELKKT HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FARKSKVIEEAEKMIADLTREARTNAAKAKEIQDAVYDLKAVNPNKKADTDNHTPEDLLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH IIETKGREIAEALAVLRIGLSIS HHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure PEPLKSLIVSLPGGVFTAAGAGVKTNHLFFSKGQSTRKIWYYDLSSIKVGKKTPLTIKT CHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCEECCCCCCCHHHH FEEFFRLLPERPDSELSWTINMDERKQKAAEEACPFKEKATATSQKVAQLSERLKELKKT HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FARKSKVIEEAEKMIADLTREARTNAAKAKEIQDAVYDLKAVNPNKKADTDNHTPEDLLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH IIETKGREIAEALAVLRIGLSIS HHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]
Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA