Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is hsdM [C]

Identifier: 119358135

GI number: 119358135

Start: 2752400

End: 2753011

Strand: Reverse

Name: hsdM [C]

Synonym: Cpha266_2367

Alternate gene names: 119358135

Gene position: 2753011-2752400 (Counterclockwise)

Preceding gene: 119358137

Following gene: 119358134

Centisome position: 87.85

GC content: 51.47

Gene sequence:

>612_bases
TTGCCGGAGCCGTTGAAATCATTAATCGTCAGCCTTCCCGGCGGAGTTTTCACAGCCGCCGGAGCAGGCGTCAAAACCAA
CCACCTCTTCTTCTCCAAAGGTCAATCCACCAGAAAAATCTGGTACTACGACCTGAGCAGCATCAAAGTCGGCAAAAAAA
CACCCCTGACCATCAAAACCTTCGAAGAGTTCTTTCGCCTCCTGCCGGAACGTCCCGATAGCGAACTCTCCTGGACCATC
AACATGGATGAGCGCAAACAGAAAGCCGCAGAAGAAGCCTGCCCATTCAAGGAAAAAGCAACCGCCACCAGTCAGAAAGT
CGCACAACTCAGCGAACGGCTGAAGGAGCTGAAGAAAACCTTTGCCCGGAAGAGCAAGGTCATCGAAGAGGCTGAAAAAA
TGATAGCCGATCTCACCCGCGAAGCCAGAACCAACGCAGCCAAAGCCAAAGAGATCCAGGACGCCGTCTACGACCTCAAA
GCTGTCAACCCCAACAAAAAAGCAGACACCGACAATCACACCCCCGAAGATCTTCTCGACATCATCGAAACCAAAGGCCG
TGAAATCGCCGAAGCATTAGCCGTACTGAGAATCGGCTTATCGATATCATAA

Upstream 100 bases:

>100_bases
TTATCCATGACCCTCAACGAAGCCGATACCAGGGCAAAGCTCATCGATCCGGCCATTCACAAACGAGGCTGGTCCGAAGA
GTTCATCAAGCGCGAAGAGA

Downstream 100 bases:

>100_bases
ATGAAACTCAAAAAAGGGCAATTCCGGTGGTAATTCGAAGCATTTATATGCCTTTTTTTGGTAACTTTTATGACTGTTAA
TCAGTTCAATAACCGGCGGT

Product: hypothetical protein

Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]

Alternate protein names: Type I Restriction Endonuclease M Subunit; Site-Specific DNA-Methyltransferase

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MPEPLKSLIVSLPGGVFTAAGAGVKTNHLFFSKGQSTRKIWYYDLSSIKVGKKTPLTIKTFEEFFRLLPERPDSELSWTI
NMDERKQKAAEEACPFKEKATATSQKVAQLSERLKELKKTFARKSKVIEEAEKMIADLTREARTNAAKAKEIQDAVYDLK
AVNPNKKADTDNHTPEDLLDIIETKGREIAEALAVLRIGLSIS

Sequences:

>Translated_203_residues
MPEPLKSLIVSLPGGVFTAAGAGVKTNHLFFSKGQSTRKIWYYDLSSIKVGKKTPLTIKTFEEFFRLLPERPDSELSWTI
NMDERKQKAAEEACPFKEKATATSQKVAQLSERLKELKKTFARKSKVIEEAEKMIADLTREARTNAAKAKEIQDAVYDLK
AVNPNKKADTDNHTPEDLLDIIETKGREIAEALAVLRIGLSIS
>Mature_202_residues
PEPLKSLIVSLPGGVFTAAGAGVKTNHLFFSKGQSTRKIWYYDLSSIKVGKKTPLTIKTFEEFFRLLPERPDSELSWTIN
MDERKQKAAEEACPFKEKATATSQKVAQLSERLKELKKTFARKSKVIEEAEKMIADLTREARTNAAKAKEIQDAVYDLKA
VNPNKKADTDNHTPEDLLDIIETKGREIAEALAVLRIGLSIS

Specific function: The M And S Subunits Together Form A Methyltransferase (Mtase) That Methylates Two Adenine Residues In Complementary Strands Of A Bipartite DNA Recognition Sequence. In The Presence Of The R Subunit The Complex Can Also Act As An Endonuclease, Binding To

COG id: COG0286

COG function: function code V; Type I restriction-modification system methyltransferase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.72 [C]

Molecular weight: Translated: 22709; Mature: 22578

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPLKSLIVSLPGGVFTAAGAGVKTNHLFFSKGQSTRKIWYYDLSSIKVGKKTPLTIKT
CCHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCEECCCCCCCHHHH
FEEFFRLLPERPDSELSWTINMDERKQKAAEEACPFKEKATATSQKVAQLSERLKELKKT
HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FARKSKVIEEAEKMIADLTREARTNAAKAKEIQDAVYDLKAVNPNKKADTDNHTPEDLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
IIETKGREIAEALAVLRIGLSIS
HHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PEPLKSLIVSLPGGVFTAAGAGVKTNHLFFSKGQSTRKIWYYDLSSIKVGKKTPLTIKT
CHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCEECCCCCCCHHHH
FEEFFRLLPERPDSELSWTINMDERKQKAAEEACPFKEKATATSQKVAQLSERLKELKKT
HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FARKSKVIEEAEKMIADLTREARTNAAKAKEIQDAVYDLKAVNPNKKADTDNHTPEDLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
IIETKGREIAEALAVLRIGLSIS
HHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]

Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA