| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is tkt [H]
Identifier: 119357933
GI number: 119357933
Start: 2485520
End: 2487535
Strand: Direct
Name: tkt [H]
Synonym: Cpha266_2148
Alternate gene names: 119357933
Gene position: 2485520-2487535 (Clockwise)
Preceding gene: 119357929
Following gene: 119357934
Centisome position: 79.31
GC content: 51.84
Gene sequence:
>2016_bases ATGCCGACTGAGCCTATAGATCTGCAGACTATCAACACCGCAAGAGTTCTTGCTGTTGACATGGTTGAAAAAGCCGGTTC CGGCCATCCGGGTATGCCGCTCGGCGCTGCTCCAATGGCCGTCGTACTCTTTACAAAGATTATGAACCACAATCCCGCCA ACCCGAAATGGCTGAACCGGGACCGATTTGTTCTTTCTGCCGGGCATGGCTCCGCCCTGCTCTATGCGTTGCTGCACCTG ACCGGCTATGACCTCTCTCTCGACGACCTGAAATCCTTCAGGCAATGGGAAAGCAAAACTCCGGGACATCCGGAATATGG CGTGACCCCTGGCGTTGAAATGACTACCGGACCTCTTGGACAGGGAATCTCGACGGCTGTCGGTATGGCTATTGCCGAAA GATTTTGTGCCAAGCACCTCAACTGCGAAGAACTCGAGCTCATAGATTACTATACCTATGTCATCTGCGGTGACGGAGAC CTTATGGAAGGAGTCAGCAGCGAAACGGCATCTCTTGCAGGTCATCTGAAGCTGGGCAAGCTGATCTGCCTGTACGACAG CAACCGAATTTCCATTGAGGGGTCAACAACTCTTGCATTTACAGAAAATGTAGGCCAGCGCTTTCTCGCCTTTGGCTGGC ATGTGGAACATTTTGATGGCAACGACCCTGATGCTGTTGAGAAGGCTCTTCTTTTTGCCAAAACCCAGAAAGATCGCCCC TCACTGCTTATCGCACACACCAATATAGGATTCGGCAGCCCCAATAAACAGGATAGCGCGGCGGCTCACGGCGAACCGCT CGGAAGTAAAGAGGTGATACTGCTGAAGCGTGGGTTTGGATTTCCTGAAGAGAAAACGTTTGAAATTTCCGATGCTGTAA AAGAACACCTGAAAACCGTCAAAAAGAAAGGTTCCGATCTTGAAGAACGCTGGAATGCGTTACGGCGCACCTATACCGAA CGATTTCCTGCTGCTTCCGAAGCTCTTGAGGAAAGACTGCAGAACCGCCTGCCCGAAGGGTGGGAAAAACTCCTCCCGGG CTTTGATTCCTCCGAAAAACTGGCTACCCGGCAAGCCTCGAAAAAGGTTCTTGATGCCATTTGCCACAAACTTCCTTTTC TTGCAGGCGGCTCGGCCGATCTTGCGCCCTCCTGCGGCACCCTGCTCAATGGCGGTATCGACTTTACGCCGGCACATTAC AACGGCGCCAACTTGAGATTCGGCGTCAGAGAACATGCCATGGGCGCCATCATCAACGGGATGGCTCTTTCTCAAATCAT CATCCCCTATGGAGCGACATTTCTGGTTTTCTCTGATTACATGAAACCGGCGCTCCGGCTTGCCGCTCTCATGAAAACGC ACTCCATCTTTATTTTTACACACGACAGCATCGCTCTTGGCGAAGACGGCCCGACCCACCAGCCGATTGAACAGCTTGCG ATGCTTCGATCTCTCCCCGGCATGGTGGTTTTGAGACCGGCTGACGCCAATGAAACAAAGGAAGCCTGGAAAATCGCTCT CACCGCGCGAAGACCTGTTTGTCTGATATTTTCAAGACAGACTCTTCCTGTACTCGACGCTGACCGTTATCCTATCTGTA GCGGCGTTCGAAAAGGAGGATATATTCTTTCGGAATGGAACAAAGAACCTCAAACGCCAGAACAAGCAGCAATCATCATC GCCACCGGCGCGGAAGTTCATACTGCTCTCGAAGCACAAAACCGGCTTGCGGAAAACGGCGTATCGGCAAGGGTTGTTTC CATGCCGTCAACCGAACTGTTTGAAGAACAGCCGCAACCCTATCGTCTCGGCGTGCTTCCCGAAAATATAACAAACAGGG TAGTGATTGAAGCCGCATCGTCATTCGGCTGGCACCGCTATGCTACTGATCGGGGGAAAATTATCGGCATCGACCATTTC GGAGCATCAGCGCCAGGCAACGTTACACTTGAAAAATTCGGCTTTACCGCATCTCATATTTTCGATACCGTACAATCGCT CCTGCATACAGCCTGA
Upstream 100 bases:
>100_bases ATAAACAAATACCTATATTAAGGGATAAAAACAACTATTCCGTACCTTTTTTTTCAGTTATCTATTCTCCATAACGTCAT GACTAAACGCTCATTCAACC
Downstream 100 bases:
>100_bases ATCGAAAAGTCTGCATGGCAAAAAACAGCATATTCCACCCGATCGGTGATGACAGGGAGCTGACTGCGATTGCAGCGGCA GTGATCATAAGCGCAGCAAA
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 671; Mature: 670
Protein sequence:
>671_residues MPTEPIDLQTINTARVLAVDMVEKAGSGHPGMPLGAAPMAVVLFTKIMNHNPANPKWLNRDRFVLSAGHGSALLYALLHL TGYDLSLDDLKSFRQWESKTPGHPEYGVTPGVEMTTGPLGQGISTAVGMAIAERFCAKHLNCEELELIDYYTYVICGDGD LMEGVSSETASLAGHLKLGKLICLYDSNRISIEGSTTLAFTENVGQRFLAFGWHVEHFDGNDPDAVEKALLFAKTQKDRP SLLIAHTNIGFGSPNKQDSAAAHGEPLGSKEVILLKRGFGFPEEKTFEISDAVKEHLKTVKKKGSDLEERWNALRRTYTE RFPAASEALEERLQNRLPEGWEKLLPGFDSSEKLATRQASKKVLDAICHKLPFLAGGSADLAPSCGTLLNGGIDFTPAHY NGANLRFGVREHAMGAIINGMALSQIIIPYGATFLVFSDYMKPALRLAALMKTHSIFIFTHDSIALGEDGPTHQPIEQLA MLRSLPGMVVLRPADANETKEAWKIALTARRPVCLIFSRQTLPVLDADRYPICSGVRKGGYILSEWNKEPQTPEQAAIII ATGAEVHTALEAQNRLAENGVSARVVSMPSTELFEEQPQPYRLGVLPENITNRVVIEAASSFGWHRYATDRGKIIGIDHF GASAPGNVTLEKFGFTASHIFDTVQSLLHTA
Sequences:
>Translated_671_residues MPTEPIDLQTINTARVLAVDMVEKAGSGHPGMPLGAAPMAVVLFTKIMNHNPANPKWLNRDRFVLSAGHGSALLYALLHL TGYDLSLDDLKSFRQWESKTPGHPEYGVTPGVEMTTGPLGQGISTAVGMAIAERFCAKHLNCEELELIDYYTYVICGDGD LMEGVSSETASLAGHLKLGKLICLYDSNRISIEGSTTLAFTENVGQRFLAFGWHVEHFDGNDPDAVEKALLFAKTQKDRP SLLIAHTNIGFGSPNKQDSAAAHGEPLGSKEVILLKRGFGFPEEKTFEISDAVKEHLKTVKKKGSDLEERWNALRRTYTE RFPAASEALEERLQNRLPEGWEKLLPGFDSSEKLATRQASKKVLDAICHKLPFLAGGSADLAPSCGTLLNGGIDFTPAHY NGANLRFGVREHAMGAIINGMALSQIIIPYGATFLVFSDYMKPALRLAALMKTHSIFIFTHDSIALGEDGPTHQPIEQLA MLRSLPGMVVLRPADANETKEAWKIALTARRPVCLIFSRQTLPVLDADRYPICSGVRKGGYILSEWNKEPQTPEQAAIII ATGAEVHTALEAQNRLAENGVSARVVSMPSTELFEEQPQPYRLGVLPENITNRVVIEAASSFGWHRYATDRGKIIGIDHF GASAPGNVTLEKFGFTASHIFDTVQSLLHTA >Mature_670_residues PTEPIDLQTINTARVLAVDMVEKAGSGHPGMPLGAAPMAVVLFTKIMNHNPANPKWLNRDRFVLSAGHGSALLYALLHLT GYDLSLDDLKSFRQWESKTPGHPEYGVTPGVEMTTGPLGQGISTAVGMAIAERFCAKHLNCEELELIDYYTYVICGDGDL MEGVSSETASLAGHLKLGKLICLYDSNRISIEGSTTLAFTENVGQRFLAFGWHVEHFDGNDPDAVEKALLFAKTQKDRPS LLIAHTNIGFGSPNKQDSAAAHGEPLGSKEVILLKRGFGFPEEKTFEISDAVKEHLKTVKKKGSDLEERWNALRRTYTER FPAASEALEERLQNRLPEGWEKLLPGFDSSEKLATRQASKKVLDAICHKLPFLAGGSADLAPSCGTLLNGGIDFTPAHYN GANLRFGVREHAMGAIINGMALSQIIIPYGATFLVFSDYMKPALRLAALMKTHSIFIFTHDSIALGEDGPTHQPIEQLAM LRSLPGMVVLRPADANETKEAWKIALTARRPVCLIFSRQTLPVLDADRYPICSGVRKGGYILSEWNKEPQTPEQAAIIIA TGAEVHTALEAQNRLAENGVSARVVSMPSTELFEEQPQPYRLGVLPENITNRVVIEAASSFGWHRYATDRGKIIGIDHFG ASAPGNVTLEKFGFTASHIFDTVQSLLHTA
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=581, Percent_Identity=27.710843373494, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI4507521, Length=581, Percent_Identity=27.710843373494, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI133778974, Length=578, Percent_Identity=26.4705882352941, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI225637459, Length=581, Percent_Identity=21.342512908778, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI225637463, Length=554, Percent_Identity=21.4801444043321, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI225637461, Length=554, Percent_Identity=21.4801444043321, Blast_Score=111, Evalue=2e-24, Organism=Escherichia coli, GI1788808, Length=667, Percent_Identity=46.9265367316342, Blast_Score=580, Evalue=1e-167, Organism=Escherichia coli, GI48994911, Length=666, Percent_Identity=45.045045045045, Blast_Score=561, Evalue=1e-161, Organism=Caenorhabditis elegans, GI17539652, Length=679, Percent_Identity=24.7422680412371, Blast_Score=181, Evalue=9e-46, Organism=Saccharomyces cerevisiae, GI6325331, Length=674, Percent_Identity=46.7359050445104, Blast_Score=570, Evalue=1e-163, Organism=Saccharomyces cerevisiae, GI6319593, Length=667, Percent_Identity=46.3268365817091, Blast_Score=548, Evalue=1e-157, Organism=Drosophila melanogaster, GI45551847, Length=670, Percent_Identity=26.1194029850746, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI45550715, Length=670, Percent_Identity=26.1194029850746, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24645119, Length=643, Percent_Identity=26.5940902021773, Blast_Score=183, Evalue=4e-46, Organism=Drosophila melanogaster, GI24666278, Length=266, Percent_Identity=33.8345864661654, Blast_Score=132, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 73274; Mature: 73143
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTEPIDLQTINTARVLAVDMVEKAGSGHPGMPLGAAPMAVVLFTKIMNHNPANPKWLNR CCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC DRFVLSAGHGSALLYALLHLTGYDLSLDDLKSFRQWESKTPGHPEYGVTPGVEMTTGPLG CEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCC QGISTAVGMAIAERFCAKHLNCEELELIDYYTYVICGDGDLMEGVSSETASLAGHLKLGK CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCHHHHCCCHHHHHHHHCEEECC LICLYDSNRISIEGSTTLAFTENVGQRFLAFGWHVEHFDGNDPDAVEKALLFAKTQKDRP EEEEEECCEEEECCCEEEEEEHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCCC SLLIAHTNIGFGSPNKQDSAAAHGEPLGSKEVILLKRGFGFPEEKTFEISDAVKEHLKTV CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHH KKKGSDLEERWNALRRTYTERFPAASEALEERLQNRLPEGWEKLLPGFDSSEKLATRQAS HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHH KKVLDAICHKLPFLAGGSADLAPSCGTLLNGGIDFTPAHYNGANLRFGVREHAMGAIING HHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHH MALSQIIIPYGATFLVFSDYMKPALRLAALMKTHSIFIFTHDSIALGEDGPTHQPIEQLA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCEEECCCCCCCCHHHHHH MLRSLPGMVVLRPADANETKEAWKIALTARRPVCLIFSRQTLPVLDADRYPICSGVRKGG HHHCCCCEEEEECCCCCCCHHHEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHCCCCCC YILSEWNKEPQTPEQAAIIIATGAEVHTALEAQNRLAENGVSARVVSMPSTELFEEQPQP EEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCC YRLGVLPENITNRVVIEAASSFGWHRYATDRGKIIGIDHFGASAPGNVTLEKFGFTASHI EEEECCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCEEEHHCCCCHHHH FDTVQSLLHTA HHHHHHHHHCC >Mature Secondary Structure PTEPIDLQTINTARVLAVDMVEKAGSGHPGMPLGAAPMAVVLFTKIMNHNPANPKWLNR CCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC DRFVLSAGHGSALLYALLHLTGYDLSLDDLKSFRQWESKTPGHPEYGVTPGVEMTTGPLG CEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCC QGISTAVGMAIAERFCAKHLNCEELELIDYYTYVICGDGDLMEGVSSETASLAGHLKLGK CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCHHHHCCCHHHHHHHHCEEECC LICLYDSNRISIEGSTTLAFTENVGQRFLAFGWHVEHFDGNDPDAVEKALLFAKTQKDRP EEEEEECCEEEECCCEEEEEEHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCCC SLLIAHTNIGFGSPNKQDSAAAHGEPLGSKEVILLKRGFGFPEEKTFEISDAVKEHLKTV CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHH KKKGSDLEERWNALRRTYTERFPAASEALEERLQNRLPEGWEKLLPGFDSSEKLATRQAS HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHH KKVLDAICHKLPFLAGGSADLAPSCGTLLNGGIDFTPAHYNGANLRFGVREHAMGAIING HHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHH MALSQIIIPYGATFLVFSDYMKPALRLAALMKTHSIFIFTHDSIALGEDGPTHQPIEQLA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCEEECCCCCCCCHHHHHH MLRSLPGMVVLRPADANETKEAWKIALTARRPVCLIFSRQTLPVLDADRYPICSGVRKGG HHHCCCCEEEEECCCCCCCHHHEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHCCCCCC YILSEWNKEPQTPEQAAIIIATGAEVHTALEAQNRLAENGVSARVVSMPSTELFEEQPQP EEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCC YRLGVLPENITNRVVIEAASSFGWHRYATDRGKIIGIDHFGASAPGNVTLEKFGFTASHI EEEECCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCEEEHHCCCCHHHH FDTVQSLLHTA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]