| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is bchF [H]
Identifier: 119357587
GI number: 119357587
Start: 2042302
End: 2042796
Strand: Direct
Name: bchF [H]
Synonym: Cpha266_1790
Alternate gene names: 119357587
Gene position: 2042302-2042796 (Clockwise)
Preceding gene: 119357586
Following gene: 119357588
Centisome position: 65.17
GC content: 46.06
Gene sequence:
>495_bases ATGCCCCGCTATACTCCGGAACAGCTCGCAAGAAGGAACGCATCAGTCTGGACAAAGGTCCAGGGAATTCTCGCCCCAAT CCAGTTTGTCATGTTTCTTGCCGGTCTCACCGTCACCTTTCTGTACAAGCAGAACATCTGGATCGATGATTTTGCATGGA TCACTTTTTTCGTTTCCCTGAAAACATTCATGCTCTTTCTGATCTTTATTACCGGAGCATTTTTTGAAAAAGAGGTGTTC GGCGCCTTCGCTTTTGCTCCGGAGTTTTTCTGGGAGGATTTCGGCAGCGCAATAGCAATGGTCGTCCATATCGCCTATTT CATTTTATTTTTCATGGGTCTTGACGAAAACATCCTGATATCGACGGCCCTTCTTGCCTATCTGAGTTATCTGATCAATG CCGCGCAGTTCCTTATCCGATTGCTCCTTGAAAAGCATCATGAAAAAAAATCAAACAGCAGCAGCCTGGCTGACAGCCTG CAGGAAAGAGTGTAA
Upstream 100 bases:
>100_bases GGTTGCCTGTTTGCCGCTCTCTCCAATTTTACTATATTCAACTACTTTTTTCAAAAGCAGTTATGGCGTCAGTAACCATC TCATGAAACGATAATCTCTT
Downstream 100 bases:
>100_bases AGTATGAAATCAAAAGCCATCGTTTTCAGCGGCTTGAGGGAGATTATCTTGCGGGAGGTCACCCTCAAACCGCTCTCTTC AACTGACATCCTTGTTGAAA
Product: 2-vinyl bacteriochlorophyllide hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MPRYTPEQLARRNASVWTKVQGILAPIQFVMFLAGLTVTFLYKQNIWIDDFAWITFFVSLKTFMLFLIFITGAFFEKEVF GAFAFAPEFFWEDFGSAIAMVVHIAYFILFFMGLDENILISTALLAYLSYLINAAQFLIRLLLEKHHEKKSNSSSLADSL QERV
Sequences:
>Translated_164_residues MPRYTPEQLARRNASVWTKVQGILAPIQFVMFLAGLTVTFLYKQNIWIDDFAWITFFVSLKTFMLFLIFITGAFFEKEVF GAFAFAPEFFWEDFGSAIAMVVHIAYFILFFMGLDENILISTALLAYLSYLINAAQFLIRLLLEKHHEKKSNSSSLADSL QERV >Mature_163_residues PRYTPEQLARRNASVWTKVQGILAPIQFVMFLAGLTVTFLYKQNIWIDDFAWITFFVSLKTFMLFLIFITGAFFEKEVFG AFAFAPEFFWEDFGSAIAMVVHIAYFILFFMGLDENILISTALLAYLSYLINAAQFLIRLLLEKHHEKKSNSSSLADSLQ ERV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009905 [H]
Pfam domain/function: PF07284 BCHF [H]
EC number: NA
Molecular weight: Translated: 18963; Mature: 18832
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRYTPEQLARRNASVWTKVQGILAPIQFVMFLAGLTVTFLYKQNIWIDDFAWITFFVSL CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH KTFMLFLIFITGAFFEKEVFGAFAFAPEFFWEDFGSAIAMVVHIAYFILFFMGLDENILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH STALLAYLSYLINAAQFLIRLLLEKHHEKKSNSSSLADSLQERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure PRYTPEQLARRNASVWTKVQGILAPIQFVMFLAGLTVTFLYKQNIWIDDFAWITFFVSL CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH KTFMLFLIFITGAFFEKEVFGAFAFAPEFFWEDFGSAIAMVVHIAYFILFFMGLDENILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH STALLAYLSYLINAAQFLIRLLLEKHHEKKSNSSSLADSLQERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10648776 [H]