| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is bchC [H]
Identifier: 119357588
GI number: 119357588
Start: 2042800
End: 2043804
Strand: Direct
Name: bchC [H]
Synonym: Cpha266_1791
Alternate gene names: 119357588
Gene position: 2042800-2043804 (Clockwise)
Preceding gene: 119357587
Following gene: 119357589
Centisome position: 65.18
GC content: 49.25
Gene sequence:
>1005_bases ATGAAATCAAAAGCCATCGTTTTCAGCGGCTTGAGGGAGATTATCTTGCGGGAGGTCACCCTCAAACCGCTCTCTTCAAC TGACATCCTTGTTGAAACCTACTGGTCGTCGATCAGTACCGGTACAGAAAAAATGGCCTTTAACGGCCTGATACCCTCTC CGCCCTTCATTTTCCCTTTTATACCAGGGTATGAAACCGTTGGCAAAATTATTGATGCGGGCGAACATGTCAACCAGAGC CTTATCGGCAAGTTTGCCTATGTTGCCGGATCGTTCGGCTATGAGGATGTGAATGCGGCTTTCGGCGGAGCTTCACAGTT CATCGTCTGCCCTGTTGACAGCATTACCGTTCTTGATACGCTTGATAACCCGCAATGCGGCATAGCCCTGCCACTTGGTG CTACGGCACTTCACATTGTGGATCTTGCCAATGTTCAAAACAAAAAAGTATTGGTGCTCGGTCAGGGTGCAGTCGGCATT CTTGCCGCTGAACTTGCCGGATTGATGGGCGCGCAACTCGTTGCAGCTACAGAACCGCATCAGAATCGCCTTAACCTCTC TTCAGCCGACCTTAAAGTAAATCCGGAAACGCAGGATGCTTCGGCAGTTCTTGCCGGTCACGAGTTCGATGTGCTCATCG ACAGCACCGGAATCATGAGCGCCATTGATACAGGTCTTCGCTTTCTCAAGTTTCACGGGGTTGTTATTTTCGGCGGCTAC TATCAGCGAGTGAACATCGACTACTCGCAAGCTTTTCAAAAAGAGCTTTCCTTTATTGCTGCAAGGCAGTGGGCACATGG CGATCTTGACCGTGTCAAGGATCTCATAGGCCGGCACAAGCTTAATGCTGAAAAAATCTTCACCCACCAGAGCCAGGTAG ACGAAAACATAACATCGGTCTACATGCAGGCATTCAGCGATCCTGACTGCCTGAAGATGATTCTTCACTGGAAAACAGAC AAAGAAGAGCAGGATACCGCCTGCTATATTGCAAGCACTTCATAA
Upstream 100 bases:
>100_bases TGCCGCGCAGTTCCTTATCCGATTGCTCCTTGAAAAGCATCATGAAAAAAAATCAAACAGCAGCAGCCTGGCTGACAGCC TGCAGGAAAGAGTGTAAAGT
Downstream 100 bases:
>100_bases TCAACCGCATTCATGCCGGCAAGAACAATAGCGATATACGGCAAGGGGGGAATTGGAAAAAGCTTCACCACAACCAATCT CACCGCTACCTTTGCCATGA
Product: chlorophyll synthesis pathway, BchC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKSKAIVFSGLREIILREVTLKPLSSTDILVETYWSSISTGTEKMAFNGLIPSPPFIFPFIPGYETVGKIIDAGEHVNQS LIGKFAYVAGSFGYEDVNAAFGGASQFIVCPVDSITVLDTLDNPQCGIALPLGATALHIVDLANVQNKKVLVLGQGAVGI LAAELAGLMGAQLVAATEPHQNRLNLSSADLKVNPETQDASAVLAGHEFDVLIDSTGIMSAIDTGLRFLKFHGVVIFGGY YQRVNIDYSQAFQKELSFIAARQWAHGDLDRVKDLIGRHKLNAEKIFTHQSQVDENITSVYMQAFSDPDCLKMILHWKTD KEEQDTACYIASTS
Sequences:
>Translated_334_residues MKSKAIVFSGLREIILREVTLKPLSSTDILVETYWSSISTGTEKMAFNGLIPSPPFIFPFIPGYETVGKIIDAGEHVNQS LIGKFAYVAGSFGYEDVNAAFGGASQFIVCPVDSITVLDTLDNPQCGIALPLGATALHIVDLANVQNKKVLVLGQGAVGI LAAELAGLMGAQLVAATEPHQNRLNLSSADLKVNPETQDASAVLAGHEFDVLIDSTGIMSAIDTGLRFLKFHGVVIFGGY YQRVNIDYSQAFQKELSFIAARQWAHGDLDRVKDLIGRHKLNAEKIFTHQSQVDENITSVYMQAFSDPDCLKMILHWKTD KEEQDTACYIASTS >Mature_334_residues MKSKAIVFSGLREIILREVTLKPLSSTDILVETYWSSISTGTEKMAFNGLIPSPPFIFPFIPGYETVGKIIDAGEHVNQS LIGKFAYVAGSFGYEDVNAAFGGASQFIVCPVDSITVLDTLDNPQCGIALPLGATALHIVDLANVQNKKVLVLGQGAVGI LAAELAGLMGAQLVAATEPHQNRLNLSSADLKVNPETQDASAVLAGHEFDVLIDSTGIMSAIDTGLRFLKFHGVVIFGGY YQRVNIDYSQAFQKELSFIAARQWAHGDLDRVKDLIGRHKLNAEKIFTHQSQVDENITSVYMQAFSDPDCLKMILHWKTD KEEQDTACYIASTS
Specific function: This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis [H]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510992, Length=304, Percent_Identity=23.6842105263158, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR005903 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N [H]
EC number: NA
Molecular weight: Translated: 36300; Mature: 36300
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKAIVFSGLREIILREVTLKPLSSTDILVETYWSSISTGTEKMAFNGLIPSPPFIFPF CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHEECCCCCCCCEEEEC IPGYETVGKIIDAGEHVNQSLIGKFAYVAGSFGYEDVNAAFGGASQFIVCPVDSITVLDT CCCHHHHHHHHHCCHHHCHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCCCEEEEEC LDNPQCGIALPLGATALHIVDLANVQNKKVLVLGQGAVGILAAELAGLMGAQLVAATEPH CCCCCCCEEECCCCHHEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHEEEECCCC QNRLNLSSADLKVNPETQDASAVLAGHEFDVLIDSTGIMSAIDTGLRFLKFHGVVIFGGY CCCCCCCCCCEEECCCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCEEEECCE YQRVNIDYSQAFQKELSFIAARQWAHGDLDRVKDLIGRHKLNAEKIFTHQSQVDENITSV EEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YMQAFSDPDCLKMILHWKTDKEEQDTACYIASTS HHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEECC >Mature Secondary Structure MKSKAIVFSGLREIILREVTLKPLSSTDILVETYWSSISTGTEKMAFNGLIPSPPFIFPF CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHEECCCCCCCCEEEEC IPGYETVGKIIDAGEHVNQSLIGKFAYVAGSFGYEDVNAAFGGASQFIVCPVDSITVLDT CCCHHHHHHHHHCCHHHCHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCCCEEEEEC LDNPQCGIALPLGATALHIVDLANVQNKKVLVLGQGAVGILAAELAGLMGAQLVAATEPH CCCCCCCEEECCCCHHEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHEEEECCCC QNRLNLSSADLKVNPETQDASAVLAGHEFDVLIDSTGIMSAIDTGLRFLKFHGVVIFGGY CCCCCCCCCCEEECCCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCEEEECCE YQRVNIDYSQAFQKELSFIAARQWAHGDLDRVKDLIGRHKLNAEKIFTHQSQVDENITSV EEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YMQAFSDPDCLKMILHWKTDKEEQDTACYIASTS HHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8437569; 10648776 [H]