| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is hflX [H]
Identifier: 119357534
GI number: 119357534
Start: 1962090
End: 1963394
Strand: Reverse
Name: hflX [H]
Synonym: Cpha266_1737
Alternate gene names: 119357534
Gene position: 1963394-1962090 (Counterclockwise)
Preceding gene: 119357538
Following gene: 119357533
Centisome position: 62.65
GC content: 48.12
Gene sequence:
>1305_bases TTGAATATAACAACCTGTGAGAAGAACAGGGAAAAGGCCGTACTGATCGGTTTATGTTCCCCTCCCGAGTTACCCAGAAC CCTTGTGGAAGAGTATCTTCAGGAGTTGGCGTTCCTTGCCGATACGGCAGGAGCGGATGTTCTCATGTCTATCATTCAGG AAAAAAAACAGCGCGATCCGGCCTCTTTTCTCGGAAAAGGAAAGGTTGACGAACTTGCTGTTTTTGTGAAGGAAAATGCT GTCGACATCGTTATCTGCGATGACGATCTTACTCCCGTGCAGGCAAGAAATCTCGAACGGGCTCTCGAGTGCAAGGTGAT TGACCGTACAGGACTTATTTTGCAGATTTTTGCCATACGGGCACAATCATCCCAGGCGAAAATACAGGTAGAGCTTGCCC AGCTTGAGTATATGCTGCCCCGGCTTTCCGGCCAGTGGACCCATTTATCCAAGCAGAAAGGAGGCATCGGAAGCAAAGGC CCTGGTGAAACACAGATAGAAACTGACCGACGTCTTGTTCGAAACCGGATCTCCCTTCTCAAACGCAAGTTGCGTGAGGT ATTGCTGCAACATGATACACAGACTCGCGGACGCCTGATTATTCCAAGGGTTGCCCTTGTAGGGTATACCAATGCAGGCA AGTCAACGTTGATGAACATACTCTGCCCTGAAGCGGAGGCCTTTGCCGAAAATCGTCTTTTCGCAACGCTTGATACGAAA ACCCGTCGGCTTGAACTTAAAATCAACAAGCTTGTTCTGCTCTCTGATACGGTTGGTTTTATCCGCAAGCTGCCGCACCA TCTTGTAGAGAGCTTCAAGTCAACGCTCGACGAGGTGCTCCAGGCGGATTTTCTTCTCCATGTGATCGATGTCAGTCACC CTGCTTTTGAGGAACAGATGGTGGTTGTCCGGGATACGCTCAGGGAACTTGGTGTTGAACATGACAACATCATTGATGTC TTCAACAAGATCGATGCGCTTGAAGACCCGGGGGCTTTGGGAGCACTTCGCATGAAGTATCCCGAAGCCGTTTTTGTGTC GGCAGCTCGGGGTTTGAACATCGCCGTGCTTAAAGAGATTATCAGCGATCATGTTGCTCTTGACTATAGGGAGCGGAAAA TTCGTACACATGTGTCGAACTACAAGCTTATCGGTTATCTTTACGAACATACTGAAGTTGTCAGCAAACGGTATCTTGAT GAAGATGTGGAGCTGACGTTCAGAGTGCATAAAAACAGCCTCAAACATATTGACGCGTTGATCAAGCCACTACTGATTCA TGACTATGCCGTTGCAGATTTATAA
Upstream 100 bases:
>100_bases ATAAGGTGTTGTCAAGATAAAACAATGCCTGTAATATAGCAAAATGCAGTGAGGTGTCTTGTTGCATTTATTATTATCAA CGTAATCAAGACCATCCGTA
Downstream 100 bases:
>100_bases CACGACCAGAAGAGAGCTTGCCGAATCGGTTTTGACTGAAGTGGTCACGACGGTTTTGCAGGAAGAGGGTTTTCTTATTG AGTCTCTTGTTGCCGTCTAT
Product: GTP-binding protein, HSR1-related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MNITTCEKNREKAVLIGLCSPPELPRTLVEEYLQELAFLADTAGADVLMSIIQEKKQRDPASFLGKGKVDELAVFVKENA VDIVICDDDLTPVQARNLERALECKVIDRTGLILQIFAIRAQSSQAKIQVELAQLEYMLPRLSGQWTHLSKQKGGIGSKG PGETQIETDRRLVRNRISLLKRKLREVLLQHDTQTRGRLIIPRVALVGYTNAGKSTLMNILCPEAEAFAENRLFATLDTK TRRLELKINKLVLLSDTVGFIRKLPHHLVESFKSTLDEVLQADFLLHVIDVSHPAFEEQMVVVRDTLRELGVEHDNIIDV FNKIDALEDPGALGALRMKYPEAVFVSAARGLNIAVLKEIISDHVALDYRERKIRTHVSNYKLIGYLYEHTEVVSKRYLD EDVELTFRVHKNSLKHIDALIKPLLIHDYAVADL
Sequences:
>Translated_434_residues MNITTCEKNREKAVLIGLCSPPELPRTLVEEYLQELAFLADTAGADVLMSIIQEKKQRDPASFLGKGKVDELAVFVKENA VDIVICDDDLTPVQARNLERALECKVIDRTGLILQIFAIRAQSSQAKIQVELAQLEYMLPRLSGQWTHLSKQKGGIGSKG PGETQIETDRRLVRNRISLLKRKLREVLLQHDTQTRGRLIIPRVALVGYTNAGKSTLMNILCPEAEAFAENRLFATLDTK TRRLELKINKLVLLSDTVGFIRKLPHHLVESFKSTLDEVLQADFLLHVIDVSHPAFEEQMVVVRDTLRELGVEHDNIIDV FNKIDALEDPGALGALRMKYPEAVFVSAARGLNIAVLKEIISDHVALDYRERKIRTHVSNYKLIGYLYEHTEVVSKRYLD EDVELTFRVHKNSLKHIDALIKPLLIHDYAVADL >Mature_434_residues MNITTCEKNREKAVLIGLCSPPELPRTLVEEYLQELAFLADTAGADVLMSIIQEKKQRDPASFLGKGKVDELAVFVKENA VDIVICDDDLTPVQARNLERALECKVIDRTGLILQIFAIRAQSSQAKIQVELAQLEYMLPRLSGQWTHLSKQKGGIGSKG PGETQIETDRRLVRNRISLLKRKLREVLLQHDTQTRGRLIIPRVALVGYTNAGKSTLMNILCPEAEAFAENRLFATLDTK TRRLELKINKLVLLSDTVGFIRKLPHHLVESFKSTLDEVLQADFLLHVIDVSHPAFEEQMVVVRDTLRELGVEHDNIIDV FNKIDALEDPGALGALRMKYPEAVFVSAARGLNIAVLKEIISDHVALDYRERKIRTHVSNYKLIGYLYEHTEVVSKRYLD EDVELTFRVHKNSLKHIDALIKPLLIHDYAVADL
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=270, Percent_Identity=35.1851851851852, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI310133116, Length=270, Percent_Identity=35.1851851851852, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI310124269, Length=262, Percent_Identity=35.1145038167939, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI310124267, Length=262, Percent_Identity=35.1145038167939, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI310124171, Length=262, Percent_Identity=35.1145038167939, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI310124169, Length=262, Percent_Identity=35.1145038167939, Blast_Score=119, Evalue=6e-27, Organism=Escherichia coli, GI1790615, Length=382, Percent_Identity=42.9319371727749, Blast_Score=283, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17561038, Length=319, Percent_Identity=29.7805642633229, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24650079, Length=351, Percent_Identity=29.9145299145299, Blast_Score=121, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 49090; Mature: 49090
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITTCEKNREKAVLIGLCSPPELPRTLVEEYLQELAFLADTAGADVLMSIIQEKKQRDP CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC ASFLGKGKVDELAVFVKENAVDIVICDDDLTPVQARNLERALECKVIDRTGLILQIFAIR HHHHCCCCHHHHEEEEECCCEEEEEECCCCCCHHHHHHHHHHHEEEECCCCCEEHHHHHH AQSSQAKIQVELAQLEYMLPRLSGQWTHLSKQKGGIGSKGPGETQIETDRRLVRNRISLL CCCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH KRKLREVLLQHDTQTRGRLIIPRVALVGYTNAGKSTLMNILCPEAEAFAENRLFATLDTK HHHHHHHHHHCCCCCCCEEEECEEEEEEECCCCHHHHHHHHCCCHHHHHCCCEEEEECCC TRRLELKINKLVLLSDTVGFIRKLPHHLVESFKSTLDEVLQADFLLHVIDVSHPAFEEQM CEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VVVRDTLRELGVEHDNIIDVFNKIDALEDPGALGALRMKYPEAVFVSAARGLNIAVLKEI HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHH ISDHVALDYRERKIRTHVSNYKLIGYLYEHTEVVSKRYLDEDVELTFRVHKNSLKHIDAL HHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHH IKPLLIHDYAVADL HHHHHHHHHHHHCC >Mature Secondary Structure MNITTCEKNREKAVLIGLCSPPELPRTLVEEYLQELAFLADTAGADVLMSIIQEKKQRDP CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC ASFLGKGKVDELAVFVKENAVDIVICDDDLTPVQARNLERALECKVIDRTGLILQIFAIR HHHHCCCCHHHHEEEEECCCEEEEEECCCCCCHHHHHHHHHHHEEEECCCCCEEHHHHHH AQSSQAKIQVELAQLEYMLPRLSGQWTHLSKQKGGIGSKGPGETQIETDRRLVRNRISLL CCCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH KRKLREVLLQHDTQTRGRLIIPRVALVGYTNAGKSTLMNILCPEAEAFAENRLFATLDTK HHHHHHHHHHCCCCCCCEEEECEEEEEEECCCCHHHHHHHHCCCHHHHHCCCEEEEECCC TRRLELKINKLVLLSDTVGFIRKLPHHLVESFKSTLDEVLQADFLLHVIDVSHPAFEEQM CEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VVVRDTLRELGVEHDNIIDVFNKIDALEDPGALGALRMKYPEAVFVSAARGLNIAVLKEI HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHH ISDHVALDYRERKIRTHVSNYKLIGYLYEHTEVVSKRYLDEDVELTFRVHKNSLKHIDAL HHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHH IKPLLIHDYAVADL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]