| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is pssA [H]
Identifier: 119357458
GI number: 119357458
Start: 1884981
End: 1885781
Strand: Reverse
Name: pssA [H]
Synonym: Cpha266_1657
Alternate gene names: 119357458
Gene position: 1885781-1884981 (Counterclockwise)
Preceding gene: 119357459
Following gene: 119357457
Centisome position: 60.17
GC content: 47.57
Gene sequence:
>801_bases ATGGGTGAAAAAGGCAGACAGATCAGGGAAAAGCGATATCCGCCGTATCTCAAGGGAGATCAATCGGGCAGGAATCGGCT TTTTGCATTTGTTTCCCGATCGTTTGTTCCGTCGGTTTTTACAGTAATGAATATGGTTTGCGGCTATGTTGCCATTGTGC TTTCCGGTGAAGGCAGTTTTGTCTGGGCTTGCTGGTTTATCATTTTCGCAGCTTTTTTTGATACCATTGACGGCTTTATC GCCAGGGTGACAAACAGTACCTCGGATTTCGGTATCGAGCTCGACTCCTTATCCGATCTTGTTTCATTTGGTGCGGCTCC GGCTTACCTGATTTATACATTCGGGCTTAACGGGCTTCCCGGAATTTCCGGGATTGTTTTCAGCTCTTTTCTGATGATCG GCAGCGGATTGAGACTGGCAAGATTTAACATCAGTGTGATCGGTTATTCAAAAGAGTCTTTTTCCGGCTTGCCGACACCC GCACAGGCGTTGACCATTGCAGGGTTTGTGCTCTGGATGAATGCCGAACCGCTTTTTACCGGCAAAGTTTTACGTGAGCT GCTTGCCTTGCTTGCTACGGTTCTTGCGTTGCTGATGGTCAGCAAAGTCAATTATGATGCGCTGCCGAAGCCTACGGTTG ATACGTTCCGCCAACAACCGCTTCAGATGTTTTTTTACGGCGCTGCTCTGTTTTCAGTTCCTGTCTTTCATGCGAAAGCT TTTTTTCTGGCCTTGTTATTGTATATTCTGCTCGGGGTGATAAGGTCGCTCAATTTGCTGTTTCGCAAGTGGCAGACCTG A
Upstream 100 bases:
>100_bases GCTCTGAAAGAGTCTGCTGTTCAAAACGGTTTTTTTCAGCAGACTGCCATTTGTGGTACGAAAAATCAAATCAGGGAACC ATTAATGAGTATTCAACTCT
Downstream 100 bases:
>100_bases CTTTTTTCAATCCATCACACATCCGATAATGTCCTATAAAGCAAAAATTAAGGTTACCCTTCGCCAATCCATCCTTGACG TTCAGGGTAAGGCTGTTGAT
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MGEKGRQIREKRYPPYLKGDQSGRNRLFAFVSRSFVPSVFTVMNMVCGYVAIVLSGEGSFVWACWFIIFAAFFDTIDGFI ARVTNSTSDFGIELDSLSDLVSFGAAPAYLIYTFGLNGLPGISGIVFSSFLMIGSGLRLARFNISVIGYSKESFSGLPTP AQALTIAGFVLWMNAEPLFTGKVLRELLALLATVLALLMVSKVNYDALPKPTVDTFRQQPLQMFFYGAALFSVPVFHAKA FFLALLLYILLGVIRSLNLLFRKWQT
Sequences:
>Translated_266_residues MGEKGRQIREKRYPPYLKGDQSGRNRLFAFVSRSFVPSVFTVMNMVCGYVAIVLSGEGSFVWACWFIIFAAFFDTIDGFI ARVTNSTSDFGIELDSLSDLVSFGAAPAYLIYTFGLNGLPGISGIVFSSFLMIGSGLRLARFNISVIGYSKESFSGLPTP AQALTIAGFVLWMNAEPLFTGKVLRELLALLATVLALLMVSKVNYDALPKPTVDTFRQQPLQMFFYGAALFSVPVFHAKA FFLALLLYILLGVIRSLNLLFRKWQT >Mature_265_residues GEKGRQIREKRYPPYLKGDQSGRNRLFAFVSRSFVPSVFTVMNMVCGYVAIVLSGEGSFVWACWFIIFAAFFDTIDGFIA RVTNSTSDFGIELDSLSDLVSFGAAPAYLIYTFGLNGLPGISGIVFSSFLMIGSGLRLARFNISVIGYSKESFSGLPTPA QALTIAGFVLWMNAEPLFTGKVLRELLALLATVLALLMVSKVNYDALPKPTVDTFRQQPLQMFFYGAALFSVPVFHAKAF FLALLLYILLGVIRSLNLLFRKWQT
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=142, Percent_Identity=37.3239436619718, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 29436; Mature: 29305
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEKGRQIREKRYPPYLKGDQSGRNRLFAFVSRSFVPSVFTVMNMVCGYVAIVLSGEGSF CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH VWACWFIIFAAFFDTIDGFIARVTNSTSDFGIELDSLSDLVSFGAAPAYLIYTFGLNGLP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCHHHEEEEECCCCCC GISGIVFSSFLMIGSGLRLARFNISVIGYSKESFSGLPTPAQALTIAGFVLWMNAEPLFT CHHHHHHHHHHHHCCCCEEEEEEEEEEEECHHHCCCCCCHHHHHHHHHHHEEECCCCCHH GKVLRELLALLATVLALLMVSKVNYDALPKPTVDTFRQQPLQMFFYGAALFSVPVFHAKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLALLLYILLGVIRSLNLLFRKWQT HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GEKGRQIREKRYPPYLKGDQSGRNRLFAFVSRSFVPSVFTVMNMVCGYVAIVLSGEGSF CCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH VWACWFIIFAAFFDTIDGFIARVTNSTSDFGIELDSLSDLVSFGAAPAYLIYTFGLNGLP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCHHHEEEEECCCCCC GISGIVFSSFLMIGSGLRLARFNISVIGYSKESFSGLPTPAQALTIAGFVLWMNAEPLFT CHHHHHHHHHHHHCCCCEEEEEEEEEEEECHHHCCCCCCHHHHHHHHHHHEEECCCCCHH GKVLRELLALLATVLALLMVSKVNYDALPKPTVDTFRQQPLQMFFYGAALFSVPVFHAKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLALLLYILLGVIRSLNLLFRKWQT HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]