| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is yexA [H]
Identifier: 119357457
GI number: 119357457
Start: 1884692
End: 1884952
Strand: Reverse
Name: yexA [H]
Synonym: Cpha266_1656
Alternate gene names: 119357457
Gene position: 1884952-1884692 (Counterclockwise)
Preceding gene: 119357458
Following gene: 119357456
Centisome position: 60.15
GC content: 41.76
Gene sequence:
>261_bases ATGTCCTATAAAGCAAAAATTAAGGTTACCCTTCGCCAATCCATCCTTGACGTTCAGGGTAAGGCTGTTGATCATGCGCT GAAGAACCTCGGGTATGCTTCTGTTGCATCGGCAAGAATTGGCAAATATATCGAGGTTAGTATCAATGAAGCAGAACGGG GAGATGCTGAACGCATCTGCTGTGAGATTTGTGAAAAGCTTCTTTCAAATCCGGTAATGGAAAACTACTTCTTTGAACTG GAATCTGAACCTGTAAATTAA
Upstream 100 bases:
>100_bases GCCTTGTTATTGTATATTCTGCTCGGGGTGATAAGGTCGCTCAATTTGCTGTTTCGCAAGTGGCAGACCTGACTTTTTTC AATCCATCACACATCCGATA
Downstream 100 bases:
>100_bases ATATCACTCGACTATGGCGGATGTAAGGGTAGGGATTGTTGTTTTTCCCGGTTCAAATTGTGATCATGACACCGAGTATG CTGTAGCCTCTTTCAGCGGC
Product: phosphoribosylformylglycinamidine synthase, purS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSYKAKIKVTLRQSILDVQGKAVDHALKNLGYASVASARIGKYIEVSINEAERGDAERICCEICEKLLSNPVMENYFFEL ESEPVN
Sequences:
>Translated_86_residues MSYKAKIKVTLRQSILDVQGKAVDHALKNLGYASVASARIGKYIEVSINEAERGDAERICCEICEKLLSNPVMENYFFEL ESEPVN >Mature_85_residues SYKAKIKVTLRQSILDVQGKAVDHALKNLGYASVASARIGKYIEVSINEAERGDAERICCEICEKLLSNPVMENYFFELE SEPVN
Specific function: Unknown
COG id: COG1828
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0062 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003850 - ProDom: PD010362 [H]
Pfam domain/function: PF02700 PurS [H]
EC number: NA
Molecular weight: Translated: 9639; Mature: 9508
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKAKIKVTLRQSILDVQGKAVDHALKNLGYASVASARIGKYIEVSINEAERGDAERIC CCCCEEEEHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCHHHHH CEICEKLLSNPVMENYFFELESEPVN HHHHHHHHCCCCHHHHHHCCCCCCCC >Mature Secondary Structure SYKAKIKVTLRQSILDVQGKAVDHALKNLGYASVASARIGKYIEVSINEAERGDAERIC CCCEEEEHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCHHHHH CEICEKLLSNPVMENYFFELESEPVN HHHHHHHHCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]