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The map label for this gene is nisX1 [H]

Identifier: 119357446

GI number: 119357446

Start: 1875082

End: 1875861

Strand: Reverse

Name: nisX1 [H]

Synonym: Cpha266_1645

Alternate gene names: 119357446

Gene position: 1875861-1875082 (Counterclockwise)

Preceding gene: 119357447

Following gene: 119357435

Centisome position: 59.86

GC content: 48.97

Gene sequence:

>780_bases
TTGACGTTCATGATGCTTGATCGCAATATCGTGGCCGTCAGCCCCAGCAGCGTGTCTCGGGTCCTGAGCGCTGCCGGACT
CTTGCAACGCTGGAACAGGAAAACCAGCAAAAAAGGAACCGGCTTTGTACAACCGCTCAAGCCGCATGAGCATTGGCATA
TCGATGTTTCTTACGTCAACCTGTGCGGCACCTTCTATTATCTCTGCACCCTGCTCGATGGGTACAGCCGTTACATCGTT
CACTGGGAACTGCGTAAGACTATGACCGAAAAGGATATTGAAATCATTATGCAGCGTGCTCGGGAGAAGTTCCCGGATGC
CAAACCACGGATCATTTCCGATAATGGGCCGCAGTTTATCGCCAAAGACTTCAAGGCATACATCCGGCTGACCGGCATGA
GTCATGTACGCACTTCACCGTACTATCCGCAGAGCAATGGTAAACTGGAACGTTACCACAAGACCATCAAAACAGAATGC
ATCCGTCCGAAAGTAGCACTCTCACTGGAAGAAGCCAGAACTCAGATTGCCGAGTATATCCGATACTACAACGAAGAACG
CTTACACAGTGCGATTGGTTATATTGCTCCCAAGGACAAGCTGGAAGGACGTGACAGACAGATTTTCAAAGAACGCGATC
AAAAACTTGAGGCCGCCAGAGCGGAACGAAAACAAAAAAGACTGGACATGAGACAGCGTCTCGATTGCCACCAGATTTTG
ACAACTGCAGCTAACATTAACTCGCTAACTCAACAGGACAATTTCTCCATTTCCAACTGA

Upstream 100 bases:

>100_bases
GCATAACGGGCTGATTCCTCGGGACTTCTGGCTGGAAGAGTGTGAGAAGCAGGCGATCATCTCATTTCATAACCAGTATC
AGCTTGATGGCTATCGTCGC

Downstream 100 bases:

>100_bases
GGCAAAACAAAAGCAGTTCATGGTATAGTGATGTGACGATTCAGGAGTGGAAAGCTGCCGGGTAGATGGTTTCATGTAAA
ATCCGTTTCAAGCTCTTTAC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTFMMLDRNIVAVSPSSVSRVLSAAGLLQRWNRKTSKKGTGFVQPLKPHEHWHIDVSYVNLCGTFYYLCTLLDGYSRYIV
HWELRKTMTEKDIEIIMQRAREKFPDAKPRIISDNGPQFIAKDFKAYIRLTGMSHVRTSPYYPQSNGKLERYHKTIKTEC
IRPKVALSLEEARTQIAEYIRYYNEERLHSAIGYIAPKDKLEGRDRQIFKERDQKLEAARAERKQKRLDMRQRLDCHQIL
TTAANINSLTQQDNFSISN

Sequences:

>Translated_259_residues
MTFMMLDRNIVAVSPSSVSRVLSAAGLLQRWNRKTSKKGTGFVQPLKPHEHWHIDVSYVNLCGTFYYLCTLLDGYSRYIV
HWELRKTMTEKDIEIIMQRAREKFPDAKPRIISDNGPQFIAKDFKAYIRLTGMSHVRTSPYYPQSNGKLERYHKTIKTEC
IRPKVALSLEEARTQIAEYIRYYNEERLHSAIGYIAPKDKLEGRDRQIFKERDQKLEAARAERKQKRLDMRQRLDCHQIL
TTAANINSLTQQDNFSISN
>Mature_258_residues
TFMMLDRNIVAVSPSSVSRVLSAAGLLQRWNRKTSKKGTGFVQPLKPHEHWHIDVSYVNLCGTFYYLCTLLDGYSRYIVH
WELRKTMTEKDIEIIMQRAREKFPDAKPRIISDNGPQFIAKDFKAYIRLTGMSHVRTSPYYPQSNGKLERYHKTIKTECI
RPKVALSLEEARTQIAEYIRYYNEERLHSAIGYIAPKDKLEGRDRQIFKERDQKLEAARAERKQKRLDMRQRLDCHQILT
TAANINSLTQQDNFSISN

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=139, Percent_Identity=28.0575539568345, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1789424, Length=139, Percent_Identity=28.0575539568345, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1789224, Length=139, Percent_Identity=28.0575539568345, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1788305, Length=139, Percent_Identity=28.0575539568345, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1787669, Length=139, Percent_Identity=28.0575539568345, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1786558, Length=139, Percent_Identity=28.0575539568345, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 30362; Mature: 30231

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFMMLDRNIVAVSPSSVSRVLSAAGLLQRWNRKTSKKGTGFVQPLKPHEHWHIDVSYVN
CEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHH
LCGTFYYLCTLLDGYSRYIVHWELRKTMTEKDIEIIMQRAREKFPDAKPRIISDNGPQFI
HHHHHHHHHHHHHCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHH
AKDFKAYIRLTGMSHVRTSPYYPQSNGKLERYHKTIKTECIRPKVALSLEEARTQIAEYI
HHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RYYNEERLHSAIGYIAPKDKLEGRDRQIFKERDQKLEAARAERKQKRLDMRQRLDCHQIL
HHHCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TTAANINSLTQQDNFSISN
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TFMMLDRNIVAVSPSSVSRVLSAAGLLQRWNRKTSKKGTGFVQPLKPHEHWHIDVSYVN
EEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHH
LCGTFYYLCTLLDGYSRYIVHWELRKTMTEKDIEIIMQRAREKFPDAKPRIISDNGPQFI
HHHHHHHHHHHHHCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHH
AKDFKAYIRLTGMSHVRTSPYYPQSNGKLERYHKTIKTECIRPKVALSLEEARTQIAEYI
HHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RYYNEERLHSAIGYIAPKDKLEGRDRQIFKERDQKLEAARAERKQKRLDMRQRLDCHQIL
HHHCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TTAANINSLTQQDNFSISN
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]