| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357447
Identifier: 119357447
GI number: 119357447
Start: 1876122
End: 1876430
Strand: Reverse
Name: 119357447
Synonym: Cpha266_1646
Alternate gene names: NA
Gene position: 1876430-1876122 (Counterclockwise)
Preceding gene: 119357448
Following gene: 119357446
Centisome position: 59.88
GC content: 45.63
Gene sequence:
>309_bases ATGCGCAAACAACGTAATAATTACCAGGCTCAAGAAAAAGTGAGCATTCTCAAACGGCATCTGGTTGACCGGGTGCCGGT CTCCGATCTGTGCGATGAATACAATCTGCAACCAACCGTCTTCTATCGTTGGCAGAAGGAATTTTTCGAGAACGGAGCTG CTGCTTTCGAAAAAAAGCATGCCACCCAAAACAAGGCAGAAGAGAAACGAATCAGCCAACTTGAATCCAAGCTGCAAACC AAGAACGAAGTGCTCTCTGAACTCATGGAGGAGCATGTAAAGTTAAAAAAAGCACTTGGGGTACTCTGA
Upstream 100 bases:
>100_bases TTACCCTTGCCATGATCACTTCAGCTAAAAGTGTTTTGGTTCAGCGTGAATTGGAGAATTCAATCGTTTGAGTTAGCGTA CAAAAACGGAGGAATTCACC
Downstream 100 bases:
>100_bases GCGCGTCCTGGGTACCCCATGATATTCGTGACGCTGTCATTGACTTCACTCAGTTATGGGCTAAAAAGAGCGACATTGCT CTAACGCGATTTATCTCGTG
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MRKQRNNYQAQEKVSILKRHLVDRVPVSDLCDEYNLQPTVFYRWQKEFFENGAAAFEKKHATQNKAEEKRISQLESKLQT KNEVLSELMEEHVKLKKALGVL
Sequences:
>Translated_102_residues MRKQRNNYQAQEKVSILKRHLVDRVPVSDLCDEYNLQPTVFYRWQKEFFENGAAAFEKKHATQNKAEEKRISQLESKLQT KNEVLSELMEEHVKLKKALGVL >Mature_102_residues MRKQRNNYQAQEKVSILKRHLVDRVPVSDLCDEYNLQPTVFYRWQKEFFENGAAAFEKKHATQNKAEEKRISQLESKLQT KNEVLSELMEEHVKLKKALGVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12076; Mature: 12076
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKQRNNYQAQEKVSILKRHLVDRVPVSDLCDEYNLQPTVFYRWQKEFFENGAAAFEKKH CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHH ATQNKAEEKRISQLESKLQTKNEVLSELMEEHVKLKKALGVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKQRNNYQAQEKVSILKRHLVDRVPVSDLCDEYNLQPTVFYRWQKEFFENGAAAFEKKH CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHH ATQNKAEEKRISQLESKLQTKNEVLSELMEEHVKLKKALGVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA