| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357435
Identifier: 119357435
GI number: 119357435
Start: 1862360
End: 1862764
Strand: Reverse
Name: 119357435
Synonym: Cpha266_1634
Alternate gene names: NA
Gene position: 1862764-1862360 (Counterclockwise)
Preceding gene: 119357446
Following gene: 119357433
Centisome position: 59.44
GC content: 51.36
Gene sequence:
>405_bases ATGAAACTGTTCGCCATTATCCGTTATGTGTGGGCTTTGCCCAATACGCTGCTTGGTCTTCTCCTTGCATTTCCGATGTT TGCTTTTGGCGGAAGCGTTTCGTTGAACAACGGCGTTCTGGAGTTTTCAGGAGGCGGTGCGAGCTGGTTTTTCAGTCATT TTCCGTTTTTCAGGAGGGTTTCGGCCATGACGCTTGGCCATGTTGTCATTGGTGTTAACGAAGAAAAGCTCGCCCGGTGG CGGGAGCATGAGCTGGTACACGTGCGCCAGTATGAGCGATGGGGCCCGTTCATGATTCCCGCATATCTCCTGAGCTCTCT TTGTGCCTGGGCAAGAGGAAAAGATGGTTACGAGGCCAATCGTTTTGAAGTTGAGGCTTATGGCCGAACAAGCAGCAAAA CCTGA
Upstream 100 bases:
>100_bases GCATAGTTCTGATAACGCATAGTTCTGATAATACAGTACCTTACCCGATAACAGCAAAAAAGTTTATACGAATAATAACA ACAACCTCTTATTTGTGTCA
Downstream 100 bases:
>100_bases AAAAGCATAAGGGTTTGGGCATAGCCCGGTTGGGCTTGTTAATAAATACAGCAGAAGTCTTTTTTTTTATAGAGGGAATG CATCCTTGAGGAGCGTTTTT
Product: signal peptide prediction
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKLFAIIRYVWALPNTLLGLLLAFPMFAFGGSVSLNNGVLEFSGGGASWFFSHFPFFRRVSAMTLGHVVIGVNEEKLARW REHELVHVRQYERWGPFMIPAYLLSSLCAWARGKDGYEANRFEVEAYGRTSSKT
Sequences:
>Translated_134_residues MKLFAIIRYVWALPNTLLGLLLAFPMFAFGGSVSLNNGVLEFSGGGASWFFSHFPFFRRVSAMTLGHVVIGVNEEKLARW REHELVHVRQYERWGPFMIPAYLLSSLCAWARGKDGYEANRFEVEAYGRTSSKT >Mature_134_residues MKLFAIIRYVWALPNTLLGLLLAFPMFAFGGSVSLNNGVLEFSGGGASWFFSHFPFFRRVSAMTLGHVVIGVNEEKLARW REHELVHVRQYERWGPFMIPAYLLSSLCAWARGKDGYEANRFEVEAYGRTSSKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15255; Mature: 15255
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFAIIRYVWALPNTLLGLLLAFPMFAFGGSVSLNNGVLEFSGGGASWFFSHFPFFRRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCHHHHHHCHHHHHH SAMTLGHVVIGVNEEKLARWREHELVHVRQYERWGPFMIPAYLLSSLCAWARGKDGYEAN HHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCCC RFEVEAYGRTSSKT EEEEEECCCCCCCC >Mature Secondary Structure MKLFAIIRYVWALPNTLLGLLLAFPMFAFGGSVSLNNGVLEFSGGGASWFFSHFPFFRRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCHHHHHHCHHHHHH SAMTLGHVVIGVNEEKLARWREHELVHVRQYERWGPFMIPAYLLSSLCAWARGKDGYEAN HHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCCC RFEVEAYGRTSSKT EEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA