| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is fabG [H]
Identifier: 119356923
GI number: 119356923
Start: 1247367
End: 1248131
Strand: Reverse
Name: fabG [H]
Synonym: Cpha266_1102
Alternate gene names: 119356923
Gene position: 1248131-1247367 (Counterclockwise)
Preceding gene: 119356924
Following gene: 119356922
Centisome position: 39.83
GC content: 47.19
Gene sequence:
>765_bases ATGGAAAAACGTCTTGCACTTATAACAGGCGGAACTTCAGGTATAGGCTTCGGTGCAGCCAAAGCGCTTGCCGAAAAGTA CGACCTTGCTCTTGCATATGCATCAAATCACGAAAAAGCTCAGGAATCGGCAGCTGAATTGCGCGTTATGGGTCATGAAG TCAGATTGTATTGCCGCCCACTTGCAGAATATCGTGATGCAAAAGAACTGTATGATGAGGTTGTATCGGATTTCGAAAAA CAACCTGAAATTCTGGTTAATTCAGCCGGACGAATTAAGGATGGGTTCTTTTTACAGACCGACTTTTCCTTTCATGACAA GCTTATCCATGAACACCTTATCGTAACCATGGCCATGTGCCAGCTTGCATTGAAATCAATGTATGGAAAACGGTTTGGCA GAATTATCAATCTCAGCTCGATAAGCGGAATCTATGCCAAACGGGGACAGGCGAACTATGCCGCCGCCAAGGCAGGAATA ATAGGATTTACCAAAACACTTGCGCTCGAAGTTGCCCACCGCGGCATTACCGTTAACGCCATTGCTCCCGGCCTGATCAG AACACCCATGACTGCCGGAGTTGTGAACTATCTCGAAAAAGCATCGGGGCGGGAAATCAACAGACACATCCCGGCGGGAT TCATCGGAGAACCGGAAGATGTAGGTTCTCTCATTGCTTTTTTGTGTTCTGATGAGGCTCGCTACATAACCGGATCCGTC ATTCCTGTTGATGGCGGAAGATCATTGGGAGACACCGGAATATGA
Upstream 100 bases:
>100_bases CCGAAGGAAGTCGTGATGTTGCGATTGATTACATTCTCAGCAACAGTTTTGGATTTGGCGGTCAGAACGCATGCCTTGTA CTAAAAAAGGAGCGGAACTG
Downstream 100 bases:
>100_bases AACATCTGACAAATAAAATCGCTGTCGTTACAGGGGGAACAAGAGGAATAGGGAGAGCCATATCGCTGCATCTTGCCGAA AGCGGAGCCAGAGTGCTCGC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MEKRLALITGGTSGIGFGAAKALAEKYDLALAYASNHEKAQESAAELRVMGHEVRLYCRPLAEYRDAKELYDEVVSDFEK QPEILVNSAGRIKDGFFLQTDFSFHDKLIHEHLIVTMAMCQLALKSMYGKRFGRIINLSSISGIYAKRGQANYAAAKAGI IGFTKTLALEVAHRGITVNAIAPGLIRTPMTAGVVNYLEKASGREINRHIPAGFIGEPEDVGSLIAFLCSDEARYITGSV IPVDGGRSLGDTGI
Sequences:
>Translated_254_residues MEKRLALITGGTSGIGFGAAKALAEKYDLALAYASNHEKAQESAAELRVMGHEVRLYCRPLAEYRDAKELYDEVVSDFEK QPEILVNSAGRIKDGFFLQTDFSFHDKLIHEHLIVTMAMCQLALKSMYGKRFGRIINLSSISGIYAKRGQANYAAAKAGI IGFTKTLALEVAHRGITVNAIAPGLIRTPMTAGVVNYLEKASGREINRHIPAGFIGEPEDVGSLIAFLCSDEARYITGSV IPVDGGRSLGDTGI >Mature_254_residues MEKRLALITGGTSGIGFGAAKALAEKYDLALAYASNHEKAQESAAELRVMGHEVRLYCRPLAEYRDAKELYDEVVSDFEK QPEILVNSAGRIKDGFFLQTDFSFHDKLIHEHLIVTMAMCQLALKSMYGKRFGRIINLSSISGIYAKRGQANYAAAKAGI IGFTKTLALEVAHRGITVNAIAPGLIRTPMTAGVVNYLEKASGREINRHIPAGFIGEPEDVGSLIAFLCSDEARYITGSV IPVDGGRSLGDTGI
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=36.4341085271318, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=33.6032388663968, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI32483357, Length=249, Percent_Identity=28.5140562248996, Blast_Score=104, Evalue=9e-23, Organism=Homo sapiens, GI19923817, Length=268, Percent_Identity=31.3432835820896, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=26.8, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=28.8617886178862, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI4504505, Length=238, Percent_Identity=29.8319327731092, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI66933014, Length=186, Percent_Identity=28.494623655914, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI59889578, Length=188, Percent_Identity=32.4468085106383, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI4503301, Length=203, Percent_Identity=30.5418719211823, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI31542939, Length=194, Percent_Identity=29.8969072164948, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=36.734693877551, Blast_Score=148, Evalue=3e-37, Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=34.8837209302326, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=29.8804780876494, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=30.6451612903226, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI2367175, Length=256, Percent_Identity=31.25, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=29.2, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1790717, Length=243, Percent_Identity=26.7489711934156, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1789378, Length=258, Percent_Identity=29.4573643410853, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786812, Length=261, Percent_Identity=26.4367816091954, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=27.710843373494, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=24.8995983935743, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1789057, Length=177, Percent_Identity=28.8135593220339, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=34.2741935483871, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=33.1983805668016, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=28.0487804878049, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71994600, Length=260, Percent_Identity=30, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71994604, Length=259, Percent_Identity=30.1158301158301, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17536651, Length=256, Percent_Identity=28.125, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=30.4, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=29.277566539924, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=32.1705426356589, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17536025, Length=259, Percent_Identity=27.7992277992278, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=29.9242424242424, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17508651, Length=248, Percent_Identity=28.2258064516129, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=31.203007518797, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17562906, Length=268, Percent_Identity=27.2388059701493, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=29.9242424242424, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=28.515625, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=31.2977099236641, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17561272, Length=222, Percent_Identity=30.1801801801802, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115534694, Length=250, Percent_Identity=27.6, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=27.2030651340996, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=27.6923076923077, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17551412, Length=262, Percent_Identity=27.0992366412214, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=27.8625954198473, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17565030, Length=260, Percent_Identity=27.6923076923077, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17568967, Length=209, Percent_Identity=29.1866028708134, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=27.9245283018868, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=27.9245283018868, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17538182, Length=258, Percent_Identity=29.0697674418605, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203117, Length=199, Percent_Identity=28.1407035175879, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193203115, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=177, Percent_Identity=37.8531073446328, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=36.2903225806452, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=33.469387755102, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=32.8, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=30.1960784313725, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI28571526, Length=255, Percent_Identity=31.3725490196078, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=30.1960784313725, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI24644337, Length=202, Percent_Identity=30.1980198019802, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI18859837, Length=249, Percent_Identity=29.3172690763052, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI24643142, Length=252, Percent_Identity=28.968253968254, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI17737361, Length=262, Percent_Identity=27.0992366412214, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27511; Mature: 27511
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKRLALITGGTSGIGFGAAKALAEKYDLALAYASNHEKAQESAAELRVMGHEVRLYCRP CCCEEEEEECCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LAEYRDAKELYDEVVSDFEKQPEILVNSAGRIKDGFFLQTDFSFHDKLIHEHLIVTMAMC HHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH QLALKSMYGKRFGRIINLSSISGIYAKRGQANYAAAKAGIIGFTKTLALEVAHRGITVNA HHHHHHHHHHHHHCEECCHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE IAPGLIRTPMTAGVVNYLEKASGREINRHIPAGFIGEPEDVGSLIAFLCSDEARYITGSV CCCCHHHCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEECEE IPVDGGRSLGDTGI EECCCCCCCCCCCC >Mature Secondary Structure MEKRLALITGGTSGIGFGAAKALAEKYDLALAYASNHEKAQESAAELRVMGHEVRLYCRP CCCEEEEEECCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LAEYRDAKELYDEVVSDFEKQPEILVNSAGRIKDGFFLQTDFSFHDKLIHEHLIVTMAMC HHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH QLALKSMYGKRFGRIINLSSISGIYAKRGQANYAAAKAGIIGFTKTLALEVAHRGITVNA HHHHHHHHHHHHHCEECCHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE IAPGLIRTPMTAGVVNYLEKASGREINRHIPAGFIGEPEDVGSLIAFLCSDEARYITGSV CCCCHHHCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEECEE IPVDGGRSLGDTGI EECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]