| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356917
Identifier: 119356917
GI number: 119356917
Start: 1240882
End: 1242237
Strand: Reverse
Name: 119356917
Synonym: Cpha266_1096
Alternate gene names: NA
Gene position: 1242237-1240882 (Counterclockwise)
Preceding gene: 119356918
Following gene: 119356914
Centisome position: 39.64
GC content: 42.99
Gene sequence:
>1356_bases ATGTTTATTTCATCTCACCATGTTTGTAAACAAACGAGTGACTCGTTGTCGCGTTTTGGAAAGATCACCGCGCTTTTTTC TTTTTTTCTTTTCCTTGCCGTATTGCCGATTTCAGTTCAGGCAGAAGAGAGTGCTGATTCCAGTGCATCCTCTTTTTCAG GTTCATTACGTCTGGGTGGCGAAGTCGAACATTTCGAAAAGAGTAATTCTCTGCTCAATCCCTCCAATATTTTAATGCGT CCCGATACTCGTGCCGAAGCTTTTTTGATTGGCAACGCTCTTTACAAAGGAATTGGCGGTGTTTTTGAAGCAGAGTTGCG GTTCAGTTATGAATATTTTTCAGGAACATCGAAAACATATTTCGAAGACCAATCATTTGATACGCAGGTCAATCAGTTGT ATTACCAGACAAAATCAGGCCCGGTTTCCTTGCTTCTCGGAAGAAAAAAAGTCCGTTGGGGAGTTGGTTACTCCTATAGT CCAACAGACCTGATTTCTCAGTTGAAAAATCCCGAAGATCCTGACGATCGTTTAAACAGAATCAAAGGAACTGATCTTGT TCAGCTCTCTTATAACAACGAAAACAGTCAACTTGATCTGGTATATCTGCCAAAAGTCAACTGGAGTTTTGACGAAACCT TTATCAGCTACAACAAATACGCCATGAGATGGTATAATTTCATCGATCCTGTCGATCTTTCGTTTGTCGGCTCAGTTGAT GAAGAGGGTGAATGGGCGGCAGGCATCAACACATCAGTCTCAATAGGGAAAGCACTGGAGCTCCACGCCGAGTACCTGTA TCAATCTTCCAATAATAAACGCTACCCTGATCTCTATAGCAATGCGTCCGATCTTGCAATACCATTCTTTTTCACAAAAA ATGGCGGGGTTCATGATGTCGTCGTTGGCGGCCAATACACGTTTGAGAACAATCTGAACCTGACGCTGGAATACCTTTAT CGGAGTTCAGGCTATTCGAACAATACATTCAATGCCTATGTCAATCACCTCGATTATCTGAACGCCGACTATCAAACATC ACTGAACCCGCTACCTGCACTTGCGGGCTTACAGGAATCAGCAATAAATTTCGATCTTCCGCTTCATAACCACTACCTTT TCGGACGGCTTTATCATCCTGACGTGATACATGGCGTTTCTGTTGAAATGTACAGTCTTGTCAGTATTGCCGATGGAAGC GGCCTGTTTGTTTTCATGCCGAAATACGAAAAAAACGATGCCTATGAAGTCTATCTGCGAGTGAAAAAGTTTTGGGGCAA GAATGATACCGAATTCGGGCTGGTACCTGAAGATTTGAGTGGCATCATAGGGGTGTCACTGTTTTTGGGCAACTAA
Upstream 100 bases:
>100_bases GGTGGTAAAAAAATCGCCCGATGGTTTTTTTCTGCAATCAAGTCTTCCCTCCCTGTACAGTGAAGTTGTCTATTAATCAA TCACAGACTATTACCTGACT
Downstream 100 bases:
>100_bases TCGCCATATCATATCGAAAGTAGCAACCAGCAGGGACAAGAGAGTATCAAACAGTAACGTCCTCTTGTCCCTGCTGGTTG GGGAAACGCCAAACAAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MFISSHHVCKQTSDSLSRFGKITALFSFFLFLAVLPISVQAEESADSSASSFSGSLRLGGEVEHFEKSNSLLNPSNILMR PDTRAEAFLIGNALYKGIGGVFEAELRFSYEYFSGTSKTYFEDQSFDTQVNQLYYQTKSGPVSLLLGRKKVRWGVGYSYS PTDLISQLKNPEDPDDRLNRIKGTDLVQLSYNNENSQLDLVYLPKVNWSFDETFISYNKYAMRWYNFIDPVDLSFVGSVD EEGEWAAGINTSVSIGKALELHAEYLYQSSNNKRYPDLYSNASDLAIPFFFTKNGGVHDVVVGGQYTFENNLNLTLEYLY RSSGYSNNTFNAYVNHLDYLNADYQTSLNPLPALAGLQESAINFDLPLHNHYLFGRLYHPDVIHGVSVEMYSLVSIADGS GLFVFMPKYEKNDAYEVYLRVKKFWGKNDTEFGLVPEDLSGIIGVSLFLGN
Sequences:
>Translated_451_residues MFISSHHVCKQTSDSLSRFGKITALFSFFLFLAVLPISVQAEESADSSASSFSGSLRLGGEVEHFEKSNSLLNPSNILMR PDTRAEAFLIGNALYKGIGGVFEAELRFSYEYFSGTSKTYFEDQSFDTQVNQLYYQTKSGPVSLLLGRKKVRWGVGYSYS PTDLISQLKNPEDPDDRLNRIKGTDLVQLSYNNENSQLDLVYLPKVNWSFDETFISYNKYAMRWYNFIDPVDLSFVGSVD EEGEWAAGINTSVSIGKALELHAEYLYQSSNNKRYPDLYSNASDLAIPFFFTKNGGVHDVVVGGQYTFENNLNLTLEYLY RSSGYSNNTFNAYVNHLDYLNADYQTSLNPLPALAGLQESAINFDLPLHNHYLFGRLYHPDVIHGVSVEMYSLVSIADGS GLFVFMPKYEKNDAYEVYLRVKKFWGKNDTEFGLVPEDLSGIIGVSLFLGN >Mature_451_residues MFISSHHVCKQTSDSLSRFGKITALFSFFLFLAVLPISVQAEESADSSASSFSGSLRLGGEVEHFEKSNSLLNPSNILMR PDTRAEAFLIGNALYKGIGGVFEAELRFSYEYFSGTSKTYFEDQSFDTQVNQLYYQTKSGPVSLLLGRKKVRWGVGYSYS PTDLISQLKNPEDPDDRLNRIKGTDLVQLSYNNENSQLDLVYLPKVNWSFDETFISYNKYAMRWYNFIDPVDLSFVGSVD EEGEWAAGINTSVSIGKALELHAEYLYQSSNNKRYPDLYSNASDLAIPFFFTKNGGVHDVVVGGQYTFENNLNLTLEYLY RSSGYSNNTFNAYVNHLDYLNADYQTSLNPLPALAGLQESAINFDLPLHNHYLFGRLYHPDVIHGVSVEMYSLVSIADGS GLFVFMPKYEKNDAYEVYLRVKKFWGKNDTEFGLVPEDLSGIIGVSLFLGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50856; Mature: 50856
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFISSHHVCKQTSDSLSRFGKITALFSFFLFLAVLPISVQAEESADSSASSFSGSLRLGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHCCCCEEECC EVEHFEKSNSLLNPSNILMRPDTRAEAFLIGNALYKGIGGVFEAELRFSYEYFSGTSKTY CHHHHHCCCCCCCCCCEEECCCCCCCEEEEHHHHHHHCCCEEEEEEEEEEEECCCCCCEE FEDQSFDTQVNQLYYQTKSGPVSLLLGRKKVRWGVGYSYSPTDLISQLKNPEDPDDRLNR ECCCCCCCHHHEEEEECCCCCEEEEECCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHH IKGTDLVQLSYNNENSQLDLVYLPKVNWSFDETFISYNKYAMRWYNFIDPVDLSFVGSVD CCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC EEGEWAAGINTSVSIGKALELHAEYLYQSSNNKRYPDLYSNASDLAIPFFFTKNGGVHDV CCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEEEEECCCCEEEE VVGGQYTFENNLNLTLEYLYRSSGYSNNTFNAYVNHLDYLNADYQTSLNPLPALAGLQES EECCEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHH AINFDLPLHNHYLFGRLYHPDVIHGVSVEMYSLVSIADGSGLFVFMPKYEKNDAYEVYLR CEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCEEEEEE VKKFWGKNDTEFGLVPEDLSGIIGVSLFLGN EHHHHCCCCCCCCCCCHHHHCCEEEEEEECC >Mature Secondary Structure MFISSHHVCKQTSDSLSRFGKITALFSFFLFLAVLPISVQAEESADSSASSFSGSLRLGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHCCCCEEECC EVEHFEKSNSLLNPSNILMRPDTRAEAFLIGNALYKGIGGVFEAELRFSYEYFSGTSKTY CHHHHHCCCCCCCCCCEEECCCCCCCEEEEHHHHHHHCCCEEEEEEEEEEEECCCCCCEE FEDQSFDTQVNQLYYQTKSGPVSLLLGRKKVRWGVGYSYSPTDLISQLKNPEDPDDRLNR ECCCCCCCHHHEEEEECCCCCEEEEECCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHH IKGTDLVQLSYNNENSQLDLVYLPKVNWSFDETFISYNKYAMRWYNFIDPVDLSFVGSVD CCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC EEGEWAAGINTSVSIGKALELHAEYLYQSSNNKRYPDLYSNASDLAIPFFFTKNGGVHDV CCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEEEEECCCCEEEE VVGGQYTFENNLNLTLEYLYRSSGYSNNTFNAYVNHLDYLNADYQTSLNPLPALAGLQES EECCEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHH AINFDLPLHNHYLFGRLYHPDVIHGVSVEMYSLVSIADGSGLFVFMPKYEKNDAYEVYLR CEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCEEEEEE VKKFWGKNDTEFGLVPEDLSGIIGVSLFLGN EHHHHCCCCCCCCCCCHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA