| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356918
Identifier: 119356918
GI number: 119356918
Start: 1242262
End: 1243065
Strand: Reverse
Name: 119356918
Synonym: Cpha266_1097
Alternate gene names: NA
Gene position: 1243065-1242262 (Counterclockwise)
Preceding gene: 119356919
Following gene: 119356917
Centisome position: 39.67
GC content: 43.28
Gene sequence:
>804_bases ATGTATAAAACTTCTTTCAGAATTCTGATTCCACTCCTTCTGCTGCTAACGGGTATAGTCGAACAGAATGGTTTTGCGGA AACGGCTTCAACTGTTTCTGAACAAAACAGCAATGCCGAAGAAATCCTCAAAAATGCAGATGATGTCAGAGCTCCATGGC CGGATTTCACCATGGCTGCAACGCTTTCGTATGAAAACCGGAGTGAACAGAAAAGAGATGTTTTCAGGGTGTTTATAAAA AACCGTACAAAAACTCTGGTCAGTTATATCGAACCGGTCAAACAGCGGGGAAATATGCTCCTTATGCTGAATGACAATCT CTGGTATTATGTCAATAAAACTCAGCGCCCCATGCGGATAACGCCCATTCAGAAGCTTTCCGGGGCAGCTTCTTATGGCG ATATTACAAAACTCAGCTGGTCTCGGGATTACCTTGCGGCTATCGAAAGTGAACAGTCCGTGACGGTAAAGCAGCAGAGC TATGAAACCTGGCTTCTCAAACTCACAGCCCGATCAAAAAGCGCAACCTATCACAAGATTGATCTGTACGTGGAAAAGGG AACCTGTTATCCTCGCAAAGCGATAGTCTTTTTGCAGTCCGGTAAAAAAATGAAAACAATGTACTTTACCGGCTATACAA AAAACGCCGGCAAAATAATGAACACGAAAATCGAATTTATTGATCATCTTGCCTCTGACAAGGTGACCACCCTTGCATTC AGCAAGGTGGTGGTAAAAAAATCGCCCGATGGTTTTTTTCTGCAATCAAGTCTTCCCTCCCTGTACAGTGAAGTTGTCTA TTAA
Upstream 100 bases:
>100_bases CTTCCATGGATAGCACTGCTGGTTATGTTCTCAACGACGTTTTCAGGATTGCTGACCCTCCTGAAAATCAGAAAAATTTC AATCGTCAATTCATTAACTC
Downstream 100 bases:
>100_bases TCAATCACAGACTATTACCTGACTATGTTTATTTCATCTCACCATGTTTGTAAACAAACGAGTGACTCGTTGTCGCGTTT TGGAAAGATCACCGCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MYKTSFRILIPLLLLLTGIVEQNGFAETASTVSEQNSNAEEILKNADDVRAPWPDFTMAATLSYENRSEQKRDVFRVFIK NRTKTLVSYIEPVKQRGNMLLMLNDNLWYYVNKTQRPMRITPIQKLSGAASYGDITKLSWSRDYLAAIESEQSVTVKQQS YETWLLKLTARSKSATYHKIDLYVEKGTCYPRKAIVFLQSGKKMKTMYFTGYTKNAGKIMNTKIEFIDHLASDKVTTLAF SKVVVKKSPDGFFLQSSLPSLYSEVVY
Sequences:
>Translated_267_residues MYKTSFRILIPLLLLLTGIVEQNGFAETASTVSEQNSNAEEILKNADDVRAPWPDFTMAATLSYENRSEQKRDVFRVFIK NRTKTLVSYIEPVKQRGNMLLMLNDNLWYYVNKTQRPMRITPIQKLSGAASYGDITKLSWSRDYLAAIESEQSVTVKQQS YETWLLKLTARSKSATYHKIDLYVEKGTCYPRKAIVFLQSGKKMKTMYFTGYTKNAGKIMNTKIEFIDHLASDKVTTLAF SKVVVKKSPDGFFLQSSLPSLYSEVVY >Mature_267_residues MYKTSFRILIPLLLLLTGIVEQNGFAETASTVSEQNSNAEEILKNADDVRAPWPDFTMAATLSYENRSEQKRDVFRVFIK NRTKTLVSYIEPVKQRGNMLLMLNDNLWYYVNKTQRPMRITPIQKLSGAASYGDITKLSWSRDYLAAIESEQSVTVKQQS YETWLLKLTARSKSATYHKIDLYVEKGTCYPRKAIVFLQSGKKMKTMYFTGYTKNAGKIMNTKIEFIDHLASDKVTTLAF SKVVVKKSPDGFFLQSSLPSLYSEVVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30579; Mature: 30579
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKTSFRILIPLLLLLTGIVEQNGFAETASTVSEQNSNAEEILKNADDVRAPWPDFTMAA CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEE TLSYENRSEQKRDVFRVFIKNRTKTLVSYIEPVKQRGNMLLMLNDNLWYYVNKTQRPMRI EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCEEE TPIQKLSGAASYGDITKLSWSRDYLAAIESEQSVTVKQQSYETWLLKLTARSKSATYHKI CCHHHHCCCCCCCCCEEEECCCHHHHHHCCCCCEEEEHHHHEEEEEEEEECCCCCEEEEE DLYVEKGTCYPRKAIVFLQSGKKMKTMYFTGYTKNAGKIMNTKIEFIDHLASDKVTTLAF EEEEECCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHH SKVVVKKSPDGFFLQSSLPSLYSEVVY EEEEEEECCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure MYKTSFRILIPLLLLLTGIVEQNGFAETASTVSEQNSNAEEILKNADDVRAPWPDFTMAA CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEE TLSYENRSEQKRDVFRVFIKNRTKTLVSYIEPVKQRGNMLLMLNDNLWYYVNKTQRPMRI EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCEEE TPIQKLSGAASYGDITKLSWSRDYLAAIESEQSVTVKQQSYETWLLKLTARSKSATYHKI CCHHHHCCCCCCCCCEEEECCCHHHHHHCCCCCEEEEHHHHEEEEEEEEECCCCCEEEEE DLYVEKGTCYPRKAIVFLQSGKKMKTMYFTGYTKNAGKIMNTKIEFIDHLASDKVTTLAF EEEEECCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHH SKVVVKKSPDGFFLQSSLPSLYSEVVY EEEEEEECCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA