Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119356914

Identifier: 119356914

GI number: 119356914

Start: 1237613

End: 1238314

Strand: Reverse

Name: 119356914

Synonym: Cpha266_1093

Alternate gene names: NA

Gene position: 1238314-1237613 (Counterclockwise)

Preceding gene: 119356917

Following gene: 119356910

Centisome position: 39.51

GC content: 47.15

Gene sequence:

>702_bases
ATGAAAAAAACAACTAAACTTTTAACCCTTTCCGTTGCTATTCTTGCAGGTCTCAGCACCCCAGCCAGGGCTGAAGGCTT
CAAAATCGGAGCAGATATCGTAAGCAGCTATGTCTGGAGAGGCACTGATCTTGGTGATTCCCCGGCCATTCAACCAAATC
TTTCCTATACCTTTCCCGGACTTGGCGTCGTCGTGGGCGCCTGGGGCTCATATGCCATTCTTGACAACACTGATGAATTT
GATCTCGATGGAAATGTTGTCGATGAATACCGTTATAAAGAGGTTGATCTCTATCTGACCGTCCCTGTCGGGCCACTCAG
TCTCACCTTGACCAATTACTATGTCCCGATTGGAGAAAACAACGAATCCTTCGATTTCAACAGCGACGGTCCAAATACCG
TTGAAGCGTCAGTAGGTTATTCCTATAAAAACCTGAGCCTGCTTGCCGCTATGTTCATTGCCGGCAACGACTACGATAAC
GCCAAATATTTCGAAGCAGGTTACAAATTCTACGACAAGGACGGCTTCAGTGCCAAAGCCGTTGTCGGTGCAGGTGATGA
AAGCTATTACGGAGACTTGGAAGGTGACAAAATCGCACTGGTAAATACCGGTATCTCGGTTTCGAAAGATCGCTTCACCG
CGTCATACATCTACAATCCCGATACTGAAAAATCGCACCTCGTCTTCATGGCGTCGTTCTAA

Upstream 100 bases:

>100_bases
CAATCGCAAGCAAAACAAGCAGCGAGTTTCAGTACACGATAACAATGCAACTAATAACTTAATATTTGGTTCTTAAACCA
GCAGAAACAGGAGTTACTCG

Downstream 100 bases:

>100_bases
GGCCTTGTCAGTTGTTCTTTTCTCCGTGTATACAGGTAATGTGTGAAACAGAAAAGGAGCCTGAAACGGCTCCTTTTCTG
TTTTTATACCCGGCATTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKKTTKLLTLSVAILAGLSTPARAEGFKIGADIVSSYVWRGTDLGDSPAIQPNLSYTFPGLGVVVGAWGSYAILDNTDEF
DLDGNVVDEYRYKEVDLYLTVPVGPLSLTLTNYYVPIGENNESFDFNSDGPNTVEASVGYSYKNLSLLAAMFIAGNDYDN
AKYFEAGYKFYDKDGFSAKAVVGAGDESYYGDLEGDKIALVNTGISVSKDRFTASYIYNPDTEKSHLVFMASF

Sequences:

>Translated_233_residues
MKKTTKLLTLSVAILAGLSTPARAEGFKIGADIVSSYVWRGTDLGDSPAIQPNLSYTFPGLGVVVGAWGSYAILDNTDEF
DLDGNVVDEYRYKEVDLYLTVPVGPLSLTLTNYYVPIGENNESFDFNSDGPNTVEASVGYSYKNLSLLAAMFIAGNDYDN
AKYFEAGYKFYDKDGFSAKAVVGAGDESYYGDLEGDKIALVNTGISVSKDRFTASYIYNPDTEKSHLVFMASF
>Mature_233_residues
MKKTTKLLTLSVAILAGLSTPARAEGFKIGADIVSSYVWRGTDLGDSPAIQPNLSYTFPGLGVVVGAWGSYAILDNTDEF
DLDGNVVDEYRYKEVDLYLTVPVGPLSLTLTNYYVPIGENNESFDFNSDGPNTVEASVGYSYKNLSLLAAMFIAGNDYDN
AKYFEAGYKFYDKDGFSAKAVVGAGDESYYGDLEGDKIALVNTGISVSKDRFTASYIYNPDTEKSHLVFMASF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25348; Mature: 25348

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTKLLTLSVAILAGLSTPARAEGFKIGADIVSSYVWRGTDLGDSPAIQPNLSYTFPG
CCCHHHHHEEEEEHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCEECCC
LGVVVGAWGSYAILDNTDEFDLDGNVVDEYRYKEVDLYLTVPVGPLSLTLTNYYVPIGEN
CEEEEECCCCEEEECCCCCCCCCCCEECCEEEEEEEEEEEECCCCEEEEEEEEEEEECCC
NESFDFNSDGPNTVEASVGYSYKNLSLLAAMFIAGNDYDNAKYFEAGYKFYDKDGFSAKA
CCCCCCCCCCCCEEEEECCCCCHHHHHHEEEEHCCCCCCCCEEEECCCEEECCCCCCEEE
VVGAGDESYYGDLEGDKIALVNTGISVSKDRFTASYIYNPDTEKSHLVFMASF
EEECCCCCEECCCCCCEEEEEECCCEECCCCEEEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure
MKKTTKLLTLSVAILAGLSTPARAEGFKIGADIVSSYVWRGTDLGDSPAIQPNLSYTFPG
CCCHHHHHEEEEEHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCEECCC
LGVVVGAWGSYAILDNTDEFDLDGNVVDEYRYKEVDLYLTVPVGPLSLTLTNYYVPIGEN
CEEEEECCCCEEEECCCCCCCCCCCEECCEEEEEEEEEEEECCCCEEEEEEEEEEEECCC
NESFDFNSDGPNTVEASVGYSYKNLSLLAAMFIAGNDYDNAKYFEAGYKFYDKDGFSAKA
CCCCCCCCCCCCEEEEECCCCCHHHHHHEEEEHCCCCCCCCEEEECCCEEECCCCCCEEE
VVGAGDESYYGDLEGDKIALVNTGISVSKDRFTASYIYNPDTEKSHLVFMASF
EEECCCCCEECCCCCCEEEEEECCCEECCCCEEEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA