Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is bchC [H]

Identifier: 119356821

GI number: 119356821

Start: 1133099

End: 1134055

Strand: Reverse

Name: bchC [H]

Synonym: Cpha266_0994

Alternate gene names: 119356821

Gene position: 1134055-1133099 (Counterclockwise)

Preceding gene: 119356822

Following gene: 119356820

Centisome position: 36.19

GC content: 47.75

Gene sequence:

>957_bases
ATGCAGGGTGACGCAAAAGCAATTGTCTTTCAGAAAGCCAATAAAATGAAGTTGCAATCTGTACCATATCGGGCAGATCA
AGCAGAGGATGTTCTGGTTAAAACTATTGCAAGCACCATTACTCCGGGACACGACAGGCTTCTTCTCACCAATAAACCGG
TATCACACAGAGTCCTTAACTATCCGCTGATGCCAGGAAGCGAATCTATCGGCCAGGTTATTGCAACCGGTTCCGGTGTA
ACCGATCTTCATCCTGGAGATTTTGTCTATACATTCAAAGGAAACCGGTGGGAGGGAATCGAGCCCTATTACGGCTGCCA
TGGCGAAGTCATTCCGACATCACGAAATAATCTGCTCCCGCTTGGTCGTCAGCCTATTCACCGGGATCTATTGACCGGGC
TGCTTGGCTATGCGATAAGCGCTCTCGAAAAAGTCAACATCAACAAGGATTCAAGGATACTCATTGTCGGTCTCGGATCG
GTAGGCCTTATGGTTTCAGAATACCTCTACAGTATTGGCGTCAGGCATATTGATGCCGTTGAAACCTTCAGCATCAGGGG
ACAACTCTCATCTGCAGAACATATCGCACTTGATATCGGCGACTTTACGGCCGAATTCAACGACTGTTTCGATATGGTGA
TTGAATGTACGGGACGCATTCTCATGATTGAAAAAGCCGTACGCCTCATGAAACCAGGAGCAACTGTCCTGCTGATGGGC
AATTATGAGGTCATGGGGTATGATTATCGCCTGATTCAGCAAAAGGAACCAGCCATCGTCTGTTCCTGCCTCACCGCACC
GGAGCACATGCAGAAAGCCCTGGCTGTGCTTGAAAACAATCAGTTCGATACCGAAAAGTTCTTTACCCATGTATTTCCTG
TCAGCCAGTTTGAACTCGCCTATCGCATGGCGCTTGACAGCAAGGAGTCCATTAAAACAGTCATAAGCTGGGTATAG

Upstream 100 bases:

>100_bases
GGGCAGTAGCAGGATCCCTTGTTATCAGCTTGATTTCATGGGTTCTCGGATCTTTTCTGATGCCATAATCAATAACGCAT
ACAGCAATAAATTTTCGACC

Downstream 100 bases:

>100_bases
GATGAACCTATGGGCATCTCTACGGCGGAAGCAGTAGGCCTTACTGCTGTCTCAAAAACATTCGGCACCTGTAAGGCAAA
CCACAACATTTCGCTCTCCA

Product: alcohol dehydrogenase

Products: L-tagatose phosphate; NADH [C]

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MQGDAKAIVFQKANKMKLQSVPYRADQAEDVLVKTIASTITPGHDRLLLTNKPVSHRVLNYPLMPGSESIGQVIATGSGV
TDLHPGDFVYTFKGNRWEGIEPYYGCHGEVIPTSRNNLLPLGRQPIHRDLLTGLLGYAISALEKVNINKDSRILIVGLGS
VGLMVSEYLYSIGVRHIDAVETFSIRGQLSSAEHIALDIGDFTAEFNDCFDMVIECTGRILMIEKAVRLMKPGATVLLMG
NYEVMGYDYRLIQQKEPAIVCSCLTAPEHMQKALAVLENNQFDTEKFFTHVFPVSQFELAYRMALDSKESIKTVISWV

Sequences:

>Translated_318_residues
MQGDAKAIVFQKANKMKLQSVPYRADQAEDVLVKTIASTITPGHDRLLLTNKPVSHRVLNYPLMPGSESIGQVIATGSGV
TDLHPGDFVYTFKGNRWEGIEPYYGCHGEVIPTSRNNLLPLGRQPIHRDLLTGLLGYAISALEKVNINKDSRILIVGLGS
VGLMVSEYLYSIGVRHIDAVETFSIRGQLSSAEHIALDIGDFTAEFNDCFDMVIECTGRILMIEKAVRLMKPGATVLLMG
NYEVMGYDYRLIQQKEPAIVCSCLTAPEHMQKALAVLENNQFDTEKFFTHVFPVSQFELAYRMALDSKESIKTVISWV
>Mature_318_residues
MQGDAKAIVFQKANKMKLQSVPYRADQAEDVLVKTIASTITPGHDRLLLTNKPVSHRVLNYPLMPGSESIGQVIATGSGV
TDLHPGDFVYTFKGNRWEGIEPYYGCHGEVIPTSRNNLLPLGRQPIHRDLLTGLLGYAISALEKVNINKDSRILIVGLGS
VGLMVSEYLYSIGVRHIDAVETFSIRGQLSSAEHIALDIGDFTAEFNDCFDMVIECTGRILMIEKAVRLMKPGATVLLMG
NYEVMGYDYRLIQQKEPAIVCSCLTAPEHMQKALAVLENNQFDTEKFFTHVFPVSQFELAYRMALDSKESIKTVISWV

Specific function: This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis [H]

COG id: COG1063

COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR005903
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N [H]

EC number: 1.1.1.251 [C]

Molecular weight: Translated: 35343; Mature: 35343

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGDAKAIVFQKANKMKLQSVPYRADQAEDVLVKTIASTITPGHDRLLLTNKPVSHRVLN
CCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHEE
YPLMPGSESIGQVIATGSGVTDLHPGDFVYTFKGNRWEGIEPYYGCHGEVIPTSRNNLLP
CCCCCCCHHHHHHEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC
LGRQPIHRDLLTGLLGYAISALEKVNINKDSRILIVGLGSVGLMVSEYLYSIGVRHIDAV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHCCHH
ETFSIRGQLSSAEHIALDIGDFTAEFNDCFDMVIECTGRILMIEKAVRLMKPGATVLLMG
HEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCEEEEEE
NYEVMGYDYRLIQQKEPAIVCSCLTAPEHMQKALAVLENNQFDTEKFFTHVFPVSQFELA
CEEEEECCEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
YRMALDSKESIKTVISWV
HHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MQGDAKAIVFQKANKMKLQSVPYRADQAEDVLVKTIASTITPGHDRLLLTNKPVSHRVLN
CCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHEE
YPLMPGSESIGQVIATGSGVTDLHPGDFVYTFKGNRWEGIEPYYGCHGEVIPTSRNNLLP
CCCCCCCHHHHHHEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC
LGRQPIHRDLLTGLLGYAISALEKVNINKDSRILIVGLGSVGLMVSEYLYSIGVRHIDAV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHCCHH
ETFSIRGQLSSAEHIALDIGDFTAEFNDCFDMVIECTGRILMIEKAVRLMKPGATVLLMG
HEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCEEEEEE
NYEVMGYDYRLIQQKEPAIVCSCLTAPEHMQKALAVLENNQFDTEKFFTHVFPVSQFELA
CEEEEECCEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
YRMALDSKESIKTVISWV
HHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Galactitol-phosphate; NAD+ [C]

Specific reaction: Galactitol-phosphate + NAD+ = L-tagatose phosphate + NADH [C]

General reaction: Oxidation; Reduction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8437569; 10648776 [H]