| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356448
Identifier: 119356448
GI number: 119356448
Start: 683983
End: 684489
Strand: Reverse
Name: 119356448
Synonym: Cpha266_0612
Alternate gene names: NA
Gene position: 684489-683983 (Counterclockwise)
Preceding gene: 119356449
Following gene: 119356447
Centisome position: 21.84
GC content: 50.1
Gene sequence:
>507_bases GTGCAAAAAGCTGAGTTCTGGATAACGCACCTGGCGTTGCAGCAACATCCTGAAGGAGGCTTCTACCGGGAAACATACCG AAATAGAGGGGGCTATGATTTCACAGGAAGCACTTCGTTCGGAGCACACCGCTCTTATGCAACGGCTATCCACTATCTGC TGAAAGAGGGTCAACAGTCAAAGCTGCACCGGATACAATCCGATGAACTCTGGTTTTTTCATACAGGTTCACCTCTTGTC GTCCATATTTTCTCTGAACTGGAGGCAAACTACTCGTCGTTTACCCTTGGCCTGGACCCGGTGTCGGGCCAACTCCTCCA GGCCTCGGTTCCAGCGGGAAGCTGGTTCGGGGCATGCTTTCCCGATAGCATCGTAACTGACCGATATACGCTGGTTAGCT GTGTTGTTGCGCCGGGTTTTGATTTCATCGATTTCGAATTTGCCAATAAAAACATACTGTCGGATATATTTCCACGACAC AAAGCACTCATCGATCGCCTCACCTGA
Upstream 100 bases:
>100_bases GCGCTTTCCGATGAAGTTCTGATGCAGGCAATCAAAGCATTCCGTCTTGGGCTTGCAGAGGAATCAAGGCTGAAAAACGA AAATATAAAACATAAACTAC
Downstream 100 bases:
>100_bases TCACGGAATAACCCTGACCATCATCATGCCTATAAGTAATGCTTCCTCGTGGGTTGGGAACGACTCGCGGACATTCCCTG CTTTTTTGTTAACTTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MQKAEFWITHLALQQHPEGGFYRETYRNRGGYDFTGSTSFGAHRSYATAIHYLLKEGQQSKLHRIQSDELWFFHTGSPLV VHIFSELEANYSSFTLGLDPVSGQLLQASVPAGSWFGACFPDSIVTDRYTLVSCVVAPGFDFIDFEFANKNILSDIFPRH KALIDRLT
Sequences:
>Translated_168_residues MQKAEFWITHLALQQHPEGGFYRETYRNRGGYDFTGSTSFGAHRSYATAIHYLLKEGQQSKLHRIQSDELWFFHTGSPLV VHIFSELEANYSSFTLGLDPVSGQLLQASVPAGSWFGACFPDSIVTDRYTLVSCVVAPGFDFIDFEFANKNILSDIFPRH KALIDRLT >Mature_168_residues MQKAEFWITHLALQQHPEGGFYRETYRNRGGYDFTGSTSFGAHRSYATAIHYLLKEGQQSKLHRIQSDELWFFHTGSPLV VHIFSELEANYSSFTLGLDPVSGQLLQASVPAGSWFGACFPDSIVTDRYTLVSCVVAPGFDFIDFEFANKNILSDIFPRH KALIDRLT
Specific function: Unknown
COG id: COG3542
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19016; Mature: 19016
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKAEFWITHLALQQHPEGGFYRETYRNRGGYDFTGSTSFGAHRSYATAIHYLLKEGQQS CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH KLHRIQSDELWFFHTGSPLVVHIFSELEANYSSFTLGLDPVSGQLLQASVPAGSWFGACF HHHHCCCCCEEEEECCCCEEEEEEHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCC PDSIVTDRYTLVSCVVAPGFDFIDFEFANKNILSDIFPRHKALIDRLT CCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQKAEFWITHLALQQHPEGGFYRETYRNRGGYDFTGSTSFGAHRSYATAIHYLLKEGQQS CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH KLHRIQSDELWFFHTGSPLVVHIFSELEANYSSFTLGLDPVSGQLLQASVPAGSWFGACF HHHHCCCCCEEEEECCCCEEEEEEHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCC PDSIVTDRYTLVSCVVAPGFDFIDFEFANKNILSDIFPRHKALIDRLT CCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA