Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119356353

Identifier: 119356353

GI number: 119356353

Start: 565905

End: 566627

Strand: Reverse

Name: 119356353

Synonym: Cpha266_0516

Alternate gene names: NA

Gene position: 566627-565905 (Counterclockwise)

Preceding gene: 119356354

Following gene: 119356345

Centisome position: 18.08

GC content: 43.98

Gene sequence:

>723_bases
ATGATGAAAGAAACTCTTGAAAAAACAGGTCATGAAAAAACAGATCCCGCATGCCAGCTCTGCGGAAACAAAAAAACCAG
CCAGCTTAAAAGAGCCATCTTTGTAGGACCTTCAGTCGCACAAGTCATTATAAAAGAGACCGGAGGATGGGATGAAACCG
GGTGGATCTGTAGTGATGATTTCCTCAAATACCAGCAGAAATATGTCGAAAAACTCCTTGCGGAAGAAAAAGGGGAACTG
ACCACACTTGACAGGGAGGTTCTCAGGGCACTGCATGAACAGGAGATCTTTTCAAAAAACCCCGACATCGACTATGATGC
CAATCTTGGTTTCGCAGACCGCTTGTCCGATAAGCTTGCTTCGTTTGGCGGCAGTTGGACATTCATCATCATGTTCGGCT
TTTTTATTTTCGGATGGATGGCCATCAACACATGGATACTTTTCTCAAAACCCTTTGATCCATTTCCCTTTATACTCCTG
AACCTTGTACTCTCTTCCCTTGCGGCCATACAGGCTCCCGTCATCATGATGAGCCAAAATCGACAGGAAGCACGTGACCG
GAAAAGGGCTATCCATGACTATCAGATCAACCTTAAGGCAGAACTCGAAATCAGGCAACTCCACCAGAAAATCGATCATA
TTCTCTCTCATCAATGGGAAAGACTGATAGAAATACAGAAAATCCAGATGGAATTGATCGATGAAATCCGTAACAACAAC
TAA

Upstream 100 bases:

>100_bases
ACACTCCCATACCGGAAGATACCTTGCTGTCGAACTGGAGGCAAAACACTCACCCGAGCTACCCGAACAAGGGATTCAAA
ACCCGATTTCCGAATGAATC

Downstream 100 bases:

>100_bases
AGCAAACCTCTGCTAACCGTCGTCGTAAACCTCGACAAATTCAGGCAACCTTATCGCAACAACGCTTATCAGAGGCACCC
CGATCTGACCGAAATGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MMKETLEKTGHEKTDPACQLCGNKKTSQLKRAIFVGPSVAQVIIKETGGWDETGWICSDDFLKYQQKYVEKLLAEEKGEL
TTLDREVLRALHEQEIFSKNPDIDYDANLGFADRLSDKLASFGGSWTFIIMFGFFIFGWMAINTWILFSKPFDPFPFILL
NLVLSSLAAIQAPVIMMSQNRQEARDRKRAIHDYQINLKAELEIRQLHQKIDHILSHQWERLIEIQKIQMELIDEIRNNN

Sequences:

>Translated_240_residues
MMKETLEKTGHEKTDPACQLCGNKKTSQLKRAIFVGPSVAQVIIKETGGWDETGWICSDDFLKYQQKYVEKLLAEEKGEL
TTLDREVLRALHEQEIFSKNPDIDYDANLGFADRLSDKLASFGGSWTFIIMFGFFIFGWMAINTWILFSKPFDPFPFILL
NLVLSSLAAIQAPVIMMSQNRQEARDRKRAIHDYQINLKAELEIRQLHQKIDHILSHQWERLIEIQKIQMELIDEIRNNN
>Mature_240_residues
MMKETLEKTGHEKTDPACQLCGNKKTSQLKRAIFVGPSVAQVIIKETGGWDETGWICSDDFLKYQQKYVEKLLAEEKGEL
TTLDREVLRALHEQEIFSKNPDIDYDANLGFADRLSDKLASFGGSWTFIIMFGFFIFGWMAINTWILFSKPFDPFPFILL
NLVLSSLAAIQAPVIMMSQNRQEARDRKRAIHDYQINLKAELEIRQLHQKIDHILSHQWERLIEIQKIQMELIDEIRNNN

Specific function: Unknown

COG id: COG4420

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27893; Mature: 27893

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKETLEKTGHEKTDPACQLCGNKKTSQLKRAIFVGPSVAQVIIKETGGWDETGWICSDD
CCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECHH
FLKYQQKYVEKLLAEEKGELTTLDREVLRALHEQEIFSKNPDIDYDANLGFADRLSDKLA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
SFGGSWTFIIMFGFFIFGWMAINTWILFSKPFDPFPFILLNLVLSSLAAIQAPVIMMSQN
HCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RQEARDRKRAIHDYQINLKAELEIRQLHQKIDHILSHQWERLIEIQKIQMELIDEIRNNN
HHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKETLEKTGHEKTDPACQLCGNKKTSQLKRAIFVGPSVAQVIIKETGGWDETGWICSDD
CCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECHH
FLKYQQKYVEKLLAEEKGELTTLDREVLRALHEQEIFSKNPDIDYDANLGFADRLSDKLA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
SFGGSWTFIIMFGFFIFGWMAINTWILFSKPFDPFPFILLNLVLSSLAAIQAPVIMMSQN
HCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RQEARDRKRAIHDYQINLKAELEIRQLHQKIDHILSHQWERLIEIQKIQMELIDEIRNNN
HHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA