| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is pab [H]
Identifier: 119356336
GI number: 119356336
Start: 547701
End: 549548
Strand: Direct
Name: pab [H]
Synonym: Cpha266_0499
Alternate gene names: 119356336
Gene position: 547701-549548 (Clockwise)
Preceding gene: 119356335
Following gene: 119356337
Centisome position: 17.48
GC content: 50.27
Gene sequence:
>1848_bases ATGCGTGATCGGGAATCTTGCAGGATTCAGCGGCTTCTTCTCCATGAGGGGACAGTCTGGCTGGACGAATCGTATGGTGC TCGACATGAGGGCGAAAGCCTGCTTTTTTCCGAACCTCTTGAGATGCTCGCTCTTTTTTCGGCAAGCGGTATCAGGGAGT TTTTTACTCTTCTCGAACAAAAACTCGACAGCGGGTATTGGCTTGCCGGATGGATGGGCTATGAGGCAGGATACGGTTTT GAGTCGGAACGCTTTCTTGCGAACTGCGATCCAGAGAGAGCTGCGCCTCTTGCCTGGTTTGGCGTTTATCGGCCCCCGGA GCGATTTGCCTCTATTGTGAGCGAGAGGATGTTTTCTCAGGTAGCTGTCGATGAACCGTTCATGATCAGCGATTTTCGTT TTAATCGCACTCCTGCCGAGTATTTTCAAGATGTTGAGAGGGTGAAACGGGAGATTGCCAAAGGAAATGTTTATCAGGTT AACGTTACCGGCCGGTTTCGTTTTTCTTTTCATGGTTCAGCTCAGGCATTGTTCGGTGCGTTGTATCCGCAGCAGCCTTC GGTGTATTCCGCTTTTATCAATACCGGTCGGCATCAGGTGCTCTCTTTTTCTCCCGAGCTTTTTTTTCGGCGCCGGGCTT GTACGATTGAAGCTATGCCGATGAAAGGGACGGCTCCGAGAAGCGGCGTTGTTGAAGAAGATAATCGACTGAAGAGGCAA TTATCGCTCTGCGAGAAGAATCGGGCTGAAAACCTGATGATTGTCGATCTGTTGCGTAACGATCTTGGCAGAATATGCAG ATCAGGTTCAGTTGAGGTTTCGGGGATGTTTGCCACTGAGACCTATCCTACGCTTCACCAGATGGTGTCAACTATTCGCG GGGAACTGAAGGATGAAAACGGTCTTTTCGAGACGTTTCGCGCTCTGTATCCCTGCGGTTCCATTACGGGAGCGCCAAAA ATCAGCGCAATGCAGTTGATCCGTGAACTTGAGCCGGGCTTGAGGGGGTGCTACACCGGTACCATCGGGTATATCAATCC TCGGAGAGATATGGTTTTCAGTGTTGCGATTCGTACGCTTGAACTGTCCGGCAATGAGGGCGTCTATGGTTCGGGCGGCG GCATCGTCTGGGATTCCGATCCGGAGGAGGAGTACCAGGAGTGCATGCTGAAGGCAAAAATTCTTGATGATGTTACCGCA GAGAGCGTTGAGCTGTTTGAGAGCATGCTTTTTTCCGGCAGATTTCTCTGGATGCAGGAGCATCTTGGACGGCTTGCGGC TTCGGCAAGAGTTCTCGGATTTGCTTTCGATGCTGCAGAGGCTGCAGCCCGACTTGCGGCCCTTGCTGATATTCTTTTCA AGGCAGGCGGACGTTTCAAGGTCAGACTCGCTCTTGAAAAAAACGGGCGGATGGCCATCAGCTATGAATCGCTGCTGTCT GATACAGGTCGCGTTCCCCTGAAGCTCTCTCTTGCGGATGGATTTATCGACTCATCAAATTCGCTTCGATTTCATAAAAC CAGTTCGCGAAAACGGTACGAACGGTATTACCGGAAAGCTCTTGAGAGCGGTTATGACGAGGTTGTGTTTCTCAATGAAC GCCAGGAGGTGACGGAAGGGGCGATCAGCAACATTATTATTCTCAAAAGCCGACGCTATGTTACTCCCTCTCTTGGTTCA GGATTGCTTGACGGCATTTATCGACGTTATTTTCTTTCTCTTCATCCGAATGCTTCAGAACAAGTGCTCACGCTGAAGGA TCTTTTCGAGGCTGATCAGGTTTTTATCTGCAATTCGGTTCGAGGATTGCGTCCCGTCGTGTTCGATGGGTTTGTTATCT CCATGTAA
Upstream 100 bases:
>100_bases CACCTTGAACCCGATATCGAGATCTGGGCTGCCGATCAACTGAAGTCCTGGCTTGAAATGGTTTTGTCGCGTTCAATCGT TATCCGCCCCCGCTCTGAGC
Downstream 100 bases:
>100_bases TGCTTCATAATAGGGTTAAATGGCCGTATATTACAGCCAGAGGAATAGATTCCGCCATTCACAAACTCATTGTTTACTAC TATGCGAGACCATACTCCTG
Product: para-aminobenzoate synthase, subunit I
Products: NA
Alternate protein names: P-aminobenzoic acid synthase; PABA synthase [H]
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MRDRESCRIQRLLLHEGTVWLDESYGARHEGESLLFSEPLEMLALFSASGIREFFTLLEQKLDSGYWLAGWMGYEAGYGF ESERFLANCDPERAAPLAWFGVYRPPERFASIVSERMFSQVAVDEPFMISDFRFNRTPAEYFQDVERVKREIAKGNVYQV NVTGRFRFSFHGSAQALFGALYPQQPSVYSAFINTGRHQVLSFSPELFFRRRACTIEAMPMKGTAPRSGVVEEDNRLKRQ LSLCEKNRAENLMIVDLLRNDLGRICRSGSVEVSGMFATETYPTLHQMVSTIRGELKDENGLFETFRALYPCGSITGAPK ISAMQLIRELEPGLRGCYTGTIGYINPRRDMVFSVAIRTLELSGNEGVYGSGGGIVWDSDPEEEYQECMLKAKILDDVTA ESVELFESMLFSGRFLWMQEHLGRLAASARVLGFAFDAAEAAARLAALADILFKAGGRFKVRLALEKNGRMAISYESLLS DTGRVPLKLSLADGFIDSSNSLRFHKTSSRKRYERYYRKALESGYDEVVFLNERQEVTEGAISNIIILKSRRYVTPSLGS GLLDGIYRRYFLSLHPNASEQVLTLKDLFEADQVFICNSVRGLRPVVFDGFVISM
Sequences:
>Translated_615_residues MRDRESCRIQRLLLHEGTVWLDESYGARHEGESLLFSEPLEMLALFSASGIREFFTLLEQKLDSGYWLAGWMGYEAGYGF ESERFLANCDPERAAPLAWFGVYRPPERFASIVSERMFSQVAVDEPFMISDFRFNRTPAEYFQDVERVKREIAKGNVYQV NVTGRFRFSFHGSAQALFGALYPQQPSVYSAFINTGRHQVLSFSPELFFRRRACTIEAMPMKGTAPRSGVVEEDNRLKRQ LSLCEKNRAENLMIVDLLRNDLGRICRSGSVEVSGMFATETYPTLHQMVSTIRGELKDENGLFETFRALYPCGSITGAPK ISAMQLIRELEPGLRGCYTGTIGYINPRRDMVFSVAIRTLELSGNEGVYGSGGGIVWDSDPEEEYQECMLKAKILDDVTA ESVELFESMLFSGRFLWMQEHLGRLAASARVLGFAFDAAEAAARLAALADILFKAGGRFKVRLALEKNGRMAISYESLLS DTGRVPLKLSLADGFIDSSNSLRFHKTSSRKRYERYYRKALESGYDEVVFLNERQEVTEGAISNIIILKSRRYVTPSLGS GLLDGIYRRYFLSLHPNASEQVLTLKDLFEADQVFICNSVRGLRPVVFDGFVISM >Mature_615_residues MRDRESCRIQRLLLHEGTVWLDESYGARHEGESLLFSEPLEMLALFSASGIREFFTLLEQKLDSGYWLAGWMGYEAGYGF ESERFLANCDPERAAPLAWFGVYRPPERFASIVSERMFSQVAVDEPFMISDFRFNRTPAEYFQDVERVKREIAKGNVYQV NVTGRFRFSFHGSAQALFGALYPQQPSVYSAFINTGRHQVLSFSPELFFRRRACTIEAMPMKGTAPRSGVVEEDNRLKRQ LSLCEKNRAENLMIVDLLRNDLGRICRSGSVEVSGMFATETYPTLHQMVSTIRGELKDENGLFETFRALYPCGSITGAPK ISAMQLIRELEPGLRGCYTGTIGYINPRRDMVFSVAIRTLELSGNEGVYGSGGGIVWDSDPEEEYQECMLKAKILDDVTA ESVELFESMLFSGRFLWMQEHLGRLAASARVLGFAFDAAEAAARLAALADILFKAGGRFKVRLALEKNGRMAISYESLLS DTGRVPLKLSLADGFIDSSNSLRFHKTSSRKRYERYYRKALESGYDEVVFLNERQEVTEGAISNIIILKSRRYVTPSLGS GLLDGIYRRYFLSLHPNASEQVLTLKDLFEADQVFICNSVRGLRPVVFDGFVISM
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=338, Percent_Identity=36.3905325443787, Blast_Score=200, Evalue=3e-52, Organism=Escherichia coli, GI1787518, Length=267, Percent_Identity=32.2097378277154, Blast_Score=131, Evalue=2e-31, Organism=Escherichia coli, GI87082077, Length=204, Percent_Identity=28.921568627451, Blast_Score=76, Evalue=8e-15, Organism=Escherichia coli, GI1786809, Length=223, Percent_Identity=26.9058295964126, Blast_Score=75, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=275, Percent_Identity=32.3636363636364, Blast_Score=150, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6324361, Length=286, Percent_Identity=27.6223776223776, Blast_Score=81, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR006805 - InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR015890 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR005802 - InterPro: IPR006221 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind; PF00117 GATase [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 69526; Mature: 69526
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDRESCRIQRLLLHEGTVWLDESYGARHEGESLLFSEPLEMLALFSASGIREFFTLLEQ CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH KLDSGYWLAGWMGYEAGYGFESERFLANCDPERAAPLAWFGVYRPPERFASIVSERMFSQ HHCCCEEEEEEECCCCCCCCCCCCEEECCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHH VAVDEPFMISDFRFNRTPAEYFQDVERVKREIAKGNVYQVNVTGRFRFSFHGSAQALFGA HHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCHHHHHHH LYPQQPSVYSAFINTGRHQVLSFSPELFFRRRACTIEAMPMKGTAPRSGVVEEDNRLKRQ CCCCCCHHHHHHHHCCCHHEEECCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHH LSLCEKNRAENLMIVDLLRNDLGRICRSGSVEVSGMFATETYPTLHQMVSTIRGELKDEN HHHHHHCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCC GLFETFRALYPCGSITGAPKISAMQLIRELEPGLRGCYTGTIGYINPRRDMVFSVAIRTL CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHEEEEEEE ELSGNEGVYGSGGGIVWDSDPEEEYQECMLKAKILDDVTAESVELFESMLFSGRFLWMQE EECCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH HLGRLAASARVLGFAFDAAEAAARLAALADILFKAGGRFKVRLALEKNGRMAISYESLLS HHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEHHHHHC DTGRVPLKLSLADGFIDSSNSLRFHKTSSRKRYERYYRKALESGYDEVVFLNERQEVTEG CCCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH AISNIIILKSRRYVTPSLGSGLLDGIYRRYFLSLHPNASEQVLTLKDLFEADQVFICNSV HHCCEEEEECCCEECCCCCCHHHHHHHHHHEEEECCCCCCCEEEHHHHHCCCCEEEECCC RGLRPVVFDGFVISM CCCCCEEECCEEECC >Mature Secondary Structure MRDRESCRIQRLLLHEGTVWLDESYGARHEGESLLFSEPLEMLALFSASGIREFFTLLEQ CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH KLDSGYWLAGWMGYEAGYGFESERFLANCDPERAAPLAWFGVYRPPERFASIVSERMFSQ HHCCCEEEEEEECCCCCCCCCCCCEEECCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHH VAVDEPFMISDFRFNRTPAEYFQDVERVKREIAKGNVYQVNVTGRFRFSFHGSAQALFGA HHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCHHHHHHH LYPQQPSVYSAFINTGRHQVLSFSPELFFRRRACTIEAMPMKGTAPRSGVVEEDNRLKRQ CCCCCCHHHHHHHHCCCHHEEECCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHH LSLCEKNRAENLMIVDLLRNDLGRICRSGSVEVSGMFATETYPTLHQMVSTIRGELKDEN HHHHHHCCCCCEEEHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCC GLFETFRALYPCGSITGAPKISAMQLIRELEPGLRGCYTGTIGYINPRRDMVFSVAIRTL CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHEEEEEEE ELSGNEGVYGSGGGIVWDSDPEEEYQECMLKAKILDDVTAESVELFESMLFSGRFLWMQE EECCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH HLGRLAASARVLGFAFDAAEAAARLAALADILFKAGGRFKVRLALEKNGRMAISYESLLS HHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEHHHHHC DTGRVPLKLSLADGFIDSSNSLRFHKTSSRKRYERYYRKALESGYDEVVFLNERQEVTEG CCCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH AISNIIILKSRRYVTPSLGSGLLDGIYRRYFLSLHPNASEQVLTLKDLFEADQVFICNSV HHCCEEEEECCCEECCCCCCHHHHHHHHHHEEEECCCCCCCEEEHHHHHCCCCEEEECCC RGLRPVVFDGFVISM CCCCCEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8472954 [H]