| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356136
Identifier: 119356136
GI number: 119356136
Start: 318232
End: 319209
Strand: Reverse
Name: 119356136
Synonym: Cpha266_0294
Alternate gene names: NA
Gene position: 319209-318232 (Counterclockwise)
Preceding gene: 119356137
Following gene: 119356127
Centisome position: 10.19
GC content: 52.86
Gene sequence:
>978_bases ATGAAACGCAAGATTCATCTCTCGCATCTCCTCGTTGCGTTATTGCTTTCACTCTGGCTGCCAATGTATGGGTGCAGTAC GCCTCATTCAGCAACTGAAGACATATCGCAGCAGCCAACTGCCGGCATAAGCGGAATGGCGCAGATCGACGGCAACTCCT GGCTCGTCGTTCACGATGCGCTATCGTTTGAAAACGGCCCAAGAATGTCGATCATAACGCTATCGGTAGATGCGGCACCG GTTCTCCATCCTGTCACGATTGACTCCTGGCCGGACGCCGGCGGCCAGGCAAGCGATCTTGAGTCACTGTGCCCGGTTCC CTCTCATCCGAACGAATATCTCATGGCTGAATCAGGAACATGGAAGGAAAAAGGCGGACGATTATTTCATCTTCGCCTCA ACGCTTTAACAAGACAGGCTGCAATTCTTGGCGTCATGAAACTGCCGGTACTGGCGGATAACAACCCTCAACAGGTTGGC GATCAGTATGAGGCTCTTGCATGCGTACGAGGGGCAGACGGCAGATTGTTGCTCCTGCTTGGCGAAAGAGGGGGATCACA ACGATTTCCGGAGGGGGTTATTCGATGGGGCGTTCTTGATATCGAGCGCCATGAGCTTCAGTTCACCGAAAAGGGGCTTG AAGGAGTGAAGGTCAATGCTCCCGGCAAATGGAAAAACGAGCTGACAAACAGGGATATCAGTGATATGTATATCTCTCCC GAAGGTGAGATCTGGGTATCGGCCGCAGAAGACAACGGAGATAACGGACCGTTCACTTCAGTGATCTACTCTCCGGGCAG AATTTCCGGTAATTTCAGTTTACCTGTTATTGCCAATCGGCATTCCGGGGTCTGGCGGACTATCGGCTCTCTCAAGATCG AGGCACTGAGCGGACCTGCCGAATCTGTCGCAGGAAGCCGTATGAGCATCGGCAGCGACGACGAAAATTATGGCGGCATC TGGAGGCCTGTGGAATAA
Upstream 100 bases:
>100_bases CGAATGCTTTCTGCGTCGTGTCAGTCAATTCCGAAGTACAATAACTTTTTTGAGGTTCCGGGGTAACAGCAACTTGTCGA ACAACTGATATCGTACTCTT
Downstream 100 bases:
>100_bases TCCGCCTGAAACAGCCTGAATTCCGACTTTCCGCACTAATTGGCAGAAGTCGGGATTCTTGTTTTCCGCTCACATCAAAT CAACCTCGCACCGCCATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKRKIHLSHLLVALLLSLWLPMYGCSTPHSATEDISQQPTAGISGMAQIDGNSWLVVHDALSFENGPRMSIITLSVDAAP VLHPVTIDSWPDAGGQASDLESLCPVPSHPNEYLMAESGTWKEKGGRLFHLRLNALTRQAAILGVMKLPVLADNNPQQVG DQYEALACVRGADGRLLLLLGERGGSQRFPEGVIRWGVLDIERHELQFTEKGLEGVKVNAPGKWKNELTNRDISDMYISP EGEIWVSAAEDNGDNGPFTSVIYSPGRISGNFSLPVIANRHSGVWRTIGSLKIEALSGPAESVAGSRMSIGSDDENYGGI WRPVE
Sequences:
>Translated_325_residues MKRKIHLSHLLVALLLSLWLPMYGCSTPHSATEDISQQPTAGISGMAQIDGNSWLVVHDALSFENGPRMSIITLSVDAAP VLHPVTIDSWPDAGGQASDLESLCPVPSHPNEYLMAESGTWKEKGGRLFHLRLNALTRQAAILGVMKLPVLADNNPQQVG DQYEALACVRGADGRLLLLLGERGGSQRFPEGVIRWGVLDIERHELQFTEKGLEGVKVNAPGKWKNELTNRDISDMYISP EGEIWVSAAEDNGDNGPFTSVIYSPGRISGNFSLPVIANRHSGVWRTIGSLKIEALSGPAESVAGSRMSIGSDDENYGGI WRPVE >Mature_325_residues MKRKIHLSHLLVALLLSLWLPMYGCSTPHSATEDISQQPTAGISGMAQIDGNSWLVVHDALSFENGPRMSIITLSVDAAP VLHPVTIDSWPDAGGQASDLESLCPVPSHPNEYLMAESGTWKEKGGRLFHLRLNALTRQAAILGVMKLPVLADNNPQQVG DQYEALACVRGADGRLLLLLGERGGSQRFPEGVIRWGVLDIERHELQFTEKGLEGVKVNAPGKWKNELTNRDISDMYISP EGEIWVSAAEDNGDNGPFTSVIYSPGRISGNFSLPVIANRHSGVWRTIGSLKIEALSGPAESVAGSRMSIGSDDENYGGI WRPVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35251; Mature: 35251
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKIHLSHLLVALLLSLWLPMYGCSTPHSATEDISQQPTAGISGMAQIDGNSWLVVHDA CCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEECCCEEEEEEEE LSFENGPRMSIITLSVDAAPVLHPVTIDSWPDAGGQASDLESLCPVPSHPNEYLMAESGT ECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCC WKEKGGRLFHLRLNALTRQAAILGVMKLPVLADNNPQQVGDQYEALACVRGADGRLLLLL CHHCCCEEEEEEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHEEEEECCCCCEEEEE GERGGSQRFPEGVIRWGVLDIERHELQFTEKGLEGVKVNAPGKWKNELTNRDISDMYISP CCCCCCCCCCCHHHEECEEEEEHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCHHEEECC EGEIWVSAAEDNGDNGPFTSVIYSPGRISGNFSLPVIANRHSGVWRTIGSLKIEALSGPA CCCEEEEEECCCCCCCCEEEEEECCCEECCCCCCEEEECCCCCCEEECCCEEEEEECCCH ESVAGSRMSIGSDDENYGGIWRPVE HHHCCCEEECCCCCCCCCCEECCCC >Mature Secondary Structure MKRKIHLSHLLVALLLSLWLPMYGCSTPHSATEDISQQPTAGISGMAQIDGNSWLVVHDA CCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEECCCEEEEEEEE LSFENGPRMSIITLSVDAAPVLHPVTIDSWPDAGGQASDLESLCPVPSHPNEYLMAESGT ECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCC WKEKGGRLFHLRLNALTRQAAILGVMKLPVLADNNPQQVGDQYEALACVRGADGRLLLLL CHHCCCEEEEEEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHEEEEECCCCCEEEEE GERGGSQRFPEGVIRWGVLDIERHELQFTEKGLEGVKVNAPGKWKNELTNRDISDMYISP CCCCCCCCCCCHHHEECEEEEEHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCHHEEECC EGEIWVSAAEDNGDNGPFTSVIYSPGRISGNFSLPVIANRHSGVWRTIGSLKIEALSGPA CCCEEEEEECCCCCCCCEEEEEECCCEECCCCCCEEEECCCCCCEEECCCEEEEEECCCH ESVAGSRMSIGSDDENYGGIWRPVE HHHCCCEEECCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA