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The map label for this gene is ybbC [H]

Identifier: 119356052

GI number: 119356052

Start: 229800

End: 230963

Strand: Direct

Name: ybbC [H]

Synonym: Cpha266_0205

Alternate gene names: 119356052

Gene position: 229800-230963 (Clockwise)

Preceding gene: 119356051

Following gene: 119356053

Centisome position: 7.33

GC content: 51.46

Gene sequence:

>1164_bases
ATGGTAAAAACAGGTCTTGATATATTTCTCGAAAACATCGACGGTTACCGGAACAGGACTATCGGCATGATTGTAAACCA
GACATCGGTCACATCAGACCTTCGTTACTCATGGAACGTACTTCGTGAAAAAGGATTGGACATCAGAAAGATATTCTCGC
CGGAACACGGCCTTTTCGCAACCGAACAGGACCAGATCGCTGTAGGGTCACAGCCTGTGCCGGATATCGAACTGGTAAGC
CTCTACGGAAGTTCCTCCGATACCCTTATTCCCGATTGCACCACACTTGACGATCTAGACCTTATACTTTTCGACATTCA
GGACGTCGGCGCCCGTTATTACACCTATGTCAACACGTTAGCCCTGTTCATGGAGGCAGCGACAGGCAGGGATCTGGAAA
TTATGGTGCTTGATCGTCCGAACCCGCTTGGGGGTGCTGTCGTTGAAGGACCGCTGCTCGACATGGCTTACCGTTCTTTC
GTCGGCATCTTTCCCGTTCCTGTGCGTCACGGAATGACACCCGGAGAGCTCGCACTTCTCTACCGCGACTGGAAAAAACT
CGATATCAGGCTCTCCGTACTCTCCATGCGGGGATGGAGCCGCACGATGCTTTTTCATGAAACAGGCCTCCCCTGGGTAC
CACCGTCGCCAAACATGCCGACAGTCGAATCTGCGGCAGTATACCCCGGTATGTGCCTTTTCGAAGGACTGAACGCATCG
GAAGGAAGAGGAACGACTACGCCATTCCAGCTCCTTGGAGCACCGTTCATCAACCCGAACCATCTCCTGGAACAGTGCAA
GGGTACGGGATTCGAAGGCATCTATCTCCGTCCAACATGGTTCAAACCTACATTTCATAAATTCCAGGGAGAGGCGATCG
GCGGTCTCTGGATACATGTATGTGATCAGAACCGCTTCCGTCCCTTTGCTACAGCTGTCGCTCTCACTGCTGCGCTCCAT
AAGCTTTACCCTGTCGATCTGCGATTTCTCGATGGCGTCTATGAATTCAACGACACCATTCCGGCGTTCGATCTTCTTGC
AGGAACCGACAGTGTCAGACATGCGCTGCTCGATGGCAATGACACGCCATCAATCATCAGCTCCTGGCAACAGGATGAAA
CCGCTTTTCTTGTGACGAAAGAACAGTACCATCTTTATCGATAA

Upstream 100 bases:

>100_bases
GCCGTAGTCGCTGAAGGGGAATGTCTCCTCAACAGTATCCGCGACAGAGAGAACACTCTGCAAACGATCCCGTGAACCAA
CCAATAACCCAGCCACCGCC

Downstream 100 bases:

>100_bases
CGGATATAACTGAAATTATCCATGCAGGCACTTGACATTGCTATCATCGTATTCTTTCTTGCAGGAAGCATCCTGCTCGG
TCTATGGCAGGGCAAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MVKTGLDIFLENIDGYRNRTIGMIVNQTSVTSDLRYSWNVLREKGLDIRKIFSPEHGLFATEQDQIAVGSQPVPDIELVS
LYGSSSDTLIPDCTTLDDLDLILFDIQDVGARYYTYVNTLALFMEAATGRDLEIMVLDRPNPLGGAVVEGPLLDMAYRSF
VGIFPVPVRHGMTPGELALLYRDWKKLDIRLSVLSMRGWSRTMLFHETGLPWVPPSPNMPTVESAAVYPGMCLFEGLNAS
EGRGTTTPFQLLGAPFINPNHLLEQCKGTGFEGIYLRPTWFKPTFHKFQGEAIGGLWIHVCDQNRFRPFATAVALTAALH
KLYPVDLRFLDGVYEFNDTIPAFDLLAGTDSVRHALLDGNDTPSIISSWQQDETAFLVTKEQYHLYR

Sequences:

>Translated_387_residues
MVKTGLDIFLENIDGYRNRTIGMIVNQTSVTSDLRYSWNVLREKGLDIRKIFSPEHGLFATEQDQIAVGSQPVPDIELVS
LYGSSSDTLIPDCTTLDDLDLILFDIQDVGARYYTYVNTLALFMEAATGRDLEIMVLDRPNPLGGAVVEGPLLDMAYRSF
VGIFPVPVRHGMTPGELALLYRDWKKLDIRLSVLSMRGWSRTMLFHETGLPWVPPSPNMPTVESAAVYPGMCLFEGLNAS
EGRGTTTPFQLLGAPFINPNHLLEQCKGTGFEGIYLRPTWFKPTFHKFQGEAIGGLWIHVCDQNRFRPFATAVALTAALH
KLYPVDLRFLDGVYEFNDTIPAFDLLAGTDSVRHALLDGNDTPSIISSWQQDETAFLVTKEQYHLYR
>Mature_387_residues
MVKTGLDIFLENIDGYRNRTIGMIVNQTSVTSDLRYSWNVLREKGLDIRKIFSPEHGLFATEQDQIAVGSQPVPDIELVS
LYGSSSDTLIPDCTTLDDLDLILFDIQDVGARYYTYVNTLALFMEAATGRDLEIMVLDRPNPLGGAVVEGPLLDMAYRSF
VGIFPVPVRHGMTPGELALLYRDWKKLDIRLSVLSMRGWSRTMLFHETGLPWVPPSPNMPTVESAAVYPGMCLFEGLNAS
EGRGTTTPFQLLGAPFINPNHLLEQCKGTGFEGIYLRPTWFKPTFHKFQGEAIGGLWIHVCDQNRFRPFATAVALTAALH
KLYPVDLRFLDGVYEFNDTIPAFDLLAGTDSVRHALLDGNDTPSIISSWQQDETAFLVTKEQYHLYR

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 43376; Mature: 43376

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTGLDIFLENIDGYRNRTIGMIVNQTSVTSDLRYSWNVLREKGLDIRKIFSPEHGLFA
CCCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEE
TEQDQIAVGSQPVPDIELVSLYGSSSDTLIPDCTTLDDLDLILFDIQDVGARYYTYVNTL
CCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHCHHHHHHHHHH
ALFMEAATGRDLEIMVLDRPNPLGGAVVEGPLLDMAYRSFVGIFPVPVRHGMTPGELALL
HHHHHHCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHCCCCCHHHCCCCHHHEEEE
YRDWKKLDIRLSVLSMRGWSRTMLFHETGLPWVPPSPNMPTVESAAVYPGMCLFEGLNAS
EECCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHCCCCHHEECCCCCC
EGRGTTTPFQLLGAPFINPNHLLEQCKGTGFEGIYLRPTWFKPTFHKFQGEAIGGLWIHV
CCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCCCEECEEEEEE
CDQNRFRPFATAVALTAALHKLYPVDLRFLDGVYEFNDTIPAFDLLAGTDSVRHALLDGN
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCCCCCHHHHHCCCHHHHHHHCCCC
DTPSIISSWQQDETAFLVTKEQYHLYR
CCHHHHHCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MVKTGLDIFLENIDGYRNRTIGMIVNQTSVTSDLRYSWNVLREKGLDIRKIFSPEHGLFA
CCCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEE
TEQDQIAVGSQPVPDIELVSLYGSSSDTLIPDCTTLDDLDLILFDIQDVGARYYTYVNTL
CCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHCHHHHHHHHHH
ALFMEAATGRDLEIMVLDRPNPLGGAVVEGPLLDMAYRSFVGIFPVPVRHGMTPGELALL
HHHHHHCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHCCCCCHHHCCCCHHHEEEE
YRDWKKLDIRLSVLSMRGWSRTMLFHETGLPWVPPSPNMPTVESAAVYPGMCLFEGLNAS
EECCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHCCCCHHEECCCCCC
EGRGTTTPFQLLGAPFINPNHLLEQCKGTGFEGIYLRPTWFKPTFHKFQGEAIGGLWIHV
CCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCCCEECEEEEEE
CDQNRFRPFATAVALTAALHKLYPVDLRFLDGVYEFNDTIPAFDLLAGTDSVRHALLDGN
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCCCCCHHHHHCCCHHHHHHHCCCC
DTPSIISSWQQDETAFLVTKEQYHLYR
CCHHHHHCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]