| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355909
Identifier: 119355909
GI number: 119355909
Start: 66590
End: 67027
Strand: Reverse
Name: 119355909
Synonym: Cpha266_0059
Alternate gene names: NA
Gene position: 67027-66590 (Counterclockwise)
Preceding gene: 119355918
Following gene: 119355906
Centisome position: 2.14
GC content: 50.68
Gene sequence:
>438_bases ATGGCTGAAGAGAACAAAAACTTCTGGGGAACGATCCCGGGAATTCTGACCGGTATCGGTACCGTTTTGACTGCCGCAAC GGGTTTTTATATGGCGATTTCAGGTGGCTCCCCGACAGCAAAACATAAGCCTGAGGCATCAGCGCCGCCCGCCACCGCTG TCATGCAGGCAACCGTTCAGACGACCCCAGCGAAAGAGGAGGTAACGCCGCATCTGCAGGATATCTTCATTCTTAAGGCA GTTATTGATGATCCGGACGGATTTACGAACGTTCGAAGCATGAAATCTTCCAGCAGTTCAATTGTCGCAAAGGTTACCCG GAACGAACAATTCCACACCTACCTTCAGGATGGGAGCTGGTGGCAGGTTAAAACGGCTGATGGAAAAATCGGCTATATGC ATACAGGTCATATCAGAATCCTCCAGGATCCCAGATAG
Upstream 100 bases:
>100_bases TATCCGTTTTCATAACCTATTTTAAAACCTTAATCCGTCATTGCTGTTTCAATCTGACAAGCTGCCGGAAATGGTTTTAT TGAACCTGTACTGAACAAGC
Downstream 100 bases:
>100_bases GGCCCCGCTATTTTACCTGAAATCCCAGTACGCTTTCGATGGCGGCTGGTAGAGTTTGCGGCGACCCGCAGAAAGCCCTT TGCCGAGCAGTTGGGAAATA
Product: SH3 type 3 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MAEENKNFWGTIPGILTGIGTVLTAATGFYMAISGGSPTAKHKPEASAPPATAVMQATVQTTPAKEEVTPHLQDIFILKA VIDDPDGFTNVRSMKSSSSSIVAKVTRNEQFHTYLQDGSWWQVKTADGKIGYMHTGHIRILQDPR
Sequences:
>Translated_145_residues MAEENKNFWGTIPGILTGIGTVLTAATGFYMAISGGSPTAKHKPEASAPPATAVMQATVQTTPAKEEVTPHLQDIFILKA VIDDPDGFTNVRSMKSSSSSIVAKVTRNEQFHTYLQDGSWWQVKTADGKIGYMHTGHIRILQDPR >Mature_144_residues AEENKNFWGTIPGILTGIGTVLTAATGFYMAISGGSPTAKHKPEASAPPATAVMQATVQTTPAKEEVTPHLQDIFILKAV IDDPDGFTNVRSMKSSSSSIVAKVTRNEQFHTYLQDGSWWQVKTADGKIGYMHTGHIRILQDPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15714; Mature: 15583
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEENKNFWGTIPGILTGIGTVLTAATGFYMAISGGSPTAKHKPEASAPPATAVMQATVQ CCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHC TTPAKEEVTPHLQDIFILKAVIDDPDGFTNVRSMKSSSSSIVAKVTRNEQFHTYLQDGSW CCCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCE WQVKTADGKIGYMHTGHIRILQDPR EEEEECCCEEEEEECCEEEEEECCC >Mature Secondary Structure AEENKNFWGTIPGILTGIGTVLTAATGFYMAISGGSPTAKHKPEASAPPATAVMQATVQ CCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHC TTPAKEEVTPHLQDIFILKAVIDDPDGFTNVRSMKSSSSSIVAKVTRNEQFHTYLQDGSW CCCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCE WQVKTADGKIGYMHTGHIRILQDPR EEEEECCCEEEEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA