| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355896
Identifier: 119355896
GI number: 119355896
Start: 48703
End: 49020
Strand: Reverse
Name: 119355896
Synonym: Cpha266_0046
Alternate gene names: NA
Gene position: 49020-48703 (Counterclockwise)
Preceding gene: 119355897
Following gene: 119355895
Centisome position: 1.56
GC content: 51.26
Gene sequence:
>318_bases ATGATCTTCTCCGTTTCAACCAGTTTATCGGCAACCCGACCGACACCTGAAACCAGGCAAACGGAACAGAGCTCAGGCCC CGATCTTCTCGACGCCTATCGTGTCGTGCTCTATAATGATGAAGAACACACTTTCGACGAGGTCATAAGTCAGATCATCA AGGCGGTGCAGTGCAATCGCCAGAAAGCAGAACGATGTACCTGGGAAGTTCATACCAAAGGGCGCAGCGTCGTGTTTGTC GGTATGATTGACCGATGCATCAAGGTCAGCGCGGTTCTTGAGGAAATCGCCCTGAAAACCGAAATCCAGACGGACTGA
Upstream 100 bases:
>100_bases TTTCCCTTGAGGCGCGTTATCCGGTGATTCATGCATAACGCTCTTGCCTCTCTGAAAGCTACGTTGTATTTTATCATTTT AAACGTATTCCTCAATCTTC
Downstream 100 bases:
>100_bases ACCTCGTCCGGCAACGTCATATCCCGAAGCCTCGCATAACCATTCCCTGCCAGACATAACGCCTGTTCAGTTTTTCTCGT CTCCCCCTGACCGGGATGGG
Product: ATP-dependent Clp protease adaptor protein ClpS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MIFSVSTSLSATRPTPETRQTEQSSGPDLLDAYRVVLYNDEEHTFDEVISQIIKAVQCNRQKAERCTWEVHTKGRSVVFV GMIDRCIKVSAVLEEIALKTEIQTD
Sequences:
>Translated_105_residues MIFSVSTSLSATRPTPETRQTEQSSGPDLLDAYRVVLYNDEEHTFDEVISQIIKAVQCNRQKAERCTWEVHTKGRSVVFV GMIDRCIKVSAVLEEIALKTEIQTD >Mature_105_residues MIFSVSTSLSATRPTPETRQTEQSSGPDLLDAYRVVLYNDEEHTFDEVISQIIKAVQCNRQKAERCTWEVHTKGRSVVFV GMIDRCIKVSAVLEEIALKTEIQTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11890; Mature: 11890
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFSVSTSLSATRPTPETRQTEQSSGPDLLDAYRVVLYNDEEHTFDEVISQIIKAVQCNR CEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCH QKAERCTWEVHTKGRSVVFVGMIDRCIKVSAVLEEIALKTEIQTD HHHHHCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIFSVSTSLSATRPTPETRQTEQSSGPDLLDAYRVVLYNDEEHTFDEVISQIIKAVQCNR CEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCH QKAERCTWEVHTKGRSVVFVGMIDRCIKVSAVLEEIALKTEIQTD HHHHHCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA