Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118581784

Identifier: 118581784

GI number: 118581784

Start: 3734711

End: 3736333

Strand: Reverse

Name: 118581784

Synonym: Ppro_3384

Alternate gene names: NA

Gene position: 3736333-3734711 (Counterclockwise)

Preceding gene: 118581785

Following gene: 118581783

Centisome position: 93.22

GC content: 61.92

Gene sequence:

>1623_bases
ATGAACAAACGTCTTTTCCTGGTCTGCCCCCTTCTCAGCCTCCTACTGTGCATCTCCTTCCCGGCCTCATCCTGCTGGGC
GCTCGCCTCCAACAACATCCCCCTGGACAGCCCGCTGTACGGTTATCTGGACAAGCTTGCCGGATACGGTTTGATTGGCA
GTGATTTCAAGGGTATCAGGCCGTTCAGCAAGGCCGAGGCCGCGCGGCTGCTGCAGGAGGCGCAGGGTAACATCCAACAG
TCGCCCGACCCCGTTCCCCCCCTGGTCGCCCAGCTGATGGTGCGTATCCGTGAACTCATCCCCCGGGAAGCTTCGCTCAG
GGAACAGCCGGACATGAAGCCGCCCCTGATCAGCTTCGATCCGAAGTCATCCATGCGCCTGCGCTATGCCTATCTGGATG
GTACGCCCCGCAACTACAAGCGCCAGGTGCATGATCCCGGCGATGACGGCGTCTTCGGCATTGGCTCGGGACTGCGCCCC
AAGAATCCCTATCCCTCGCCGGCAACCCAGCGCGGCAGCGAGGGGACGCCGCTCATGGCCAATAACAACGGCATCGTCTA
CCGCGAGGGACATAATGCCGAGCTGCGCTGGGCGGTGGAGGGGCACCTGGGTGGGGACGTCTCCGGCCTGCTGGAGACCT
CCCTGCTCTACTCCAAAAGTGGATCGGATGCGGACCTTGAGCTGAACCGGGGCTATGTCAAGTTGGGGGGAGGGTCGCTG
GAGCTGGAGGCGGGCAAGGATGAGAACTGGCTGGGGCTGGGGTATCGCGGCGCCATCACCCTTTCCAACAATGCCGAAAA
CATGACCCAGGTCAAGCTCTCCAGCCCGGAACCGTTCAGGGTCAAGTACGTGGGCGACATGAAGTTCGCCCTGATCGGCT
CCCGTCTGGATAAAACCGTAACCGATGGAGAAGAGCGCCAGCCCTGGTTCTATGCCTTGAAGCTGTCAGCCAAGCCGACA
TCCAACCTGGAGATTGGTTTCAACCTGGGCAGGCAGGTGGGCGGTCCGGGGGTTAACAACAGCCTGGGAGACATGGTGCG
AGGGCTTGTCGGCGGCACCGGCGCGGACAACTCCAACGGCATGGCCGGTTTCGAGATGCGCTACCGCATCCCCTGGCTGC
GCAATACCGAGCTGTACGGCGAGTTTTCCGGCGAAGATACGGCGGCCTTCTGGCCCATTGTGGAGAGTTATCTGGCCGGC
ATCTACATACCCCGGCTGACCTCTGACGGCAAAAACGACTTCCGCTTCGAATTCTTTCAGGGCAACCGGATCCTCTACAC
CAACAGCACCTTCCCCGCCGGTTACCTGTACAAGAACATGCCCATCGGCCACTCCCAGGGGGGAGCCACCCGGGACTACT
ACAGCCGCTTCTGCCACTGGTTCGGCGTGCGCAACAACCTGGCGCTGGAGTACATTTACACCACCCGCGGCGAAAGCGGC
CGCATGCCTGGCCAGGCGGTGGAATACAAGCATGCCGGCCGCGTCTCCTGGACCCTGCCGGTGTACGGCGACCTGGATGC
CCAGGCGACCTACGGCATCGAGAAGGTCTCCAACCTGAACCTGGAGAACGGCGATGACAGGACCAACCAGCTGGTCAGCA
TCGAGCTGAGATACCGCTACTGA

Upstream 100 bases:

>100_bases
TTTTATGCTCAACCCATGAGAAACCTCCTATACTCGGGGACGGCTCTGTGGTATCTTCTGCTGCCGCAGGGTTGTCACCT
CTTGTGTTCGGAGTGTTTTG

Downstream 100 bases:

>100_bases
AATACCCTCGGGCAACAGCCAGCCCCAAAGAAATCTCGAATATACTCTTCGAACAAAAAGCCGCGTCGCAGGATGCGGCT
TTTTCTGATAGTATCCCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MNKRLFLVCPLLSLLLCISFPASSCWALASNNIPLDSPLYGYLDKLAGYGLIGSDFKGIRPFSKAEAARLLQEAQGNIQQ
SPDPVPPLVAQLMVRIRELIPREASLREQPDMKPPLISFDPKSSMRLRYAYLDGTPRNYKRQVHDPGDDGVFGIGSGLRP
KNPYPSPATQRGSEGTPLMANNNGIVYREGHNAELRWAVEGHLGGDVSGLLETSLLYSKSGSDADLELNRGYVKLGGGSL
ELEAGKDENWLGLGYRGAITLSNNAENMTQVKLSSPEPFRVKYVGDMKFALIGSRLDKTVTDGEERQPWFYALKLSAKPT
SNLEIGFNLGRQVGGPGVNNSLGDMVRGLVGGTGADNSNGMAGFEMRYRIPWLRNTELYGEFSGEDTAAFWPIVESYLAG
IYIPRLTSDGKNDFRFEFFQGNRILYTNSTFPAGYLYKNMPIGHSQGGATRDYYSRFCHWFGVRNNLALEYIYTTRGESG
RMPGQAVEYKHAGRVSWTLPVYGDLDAQATYGIEKVSNLNLENGDDRTNQLVSIELRYRY

Sequences:

>Translated_540_residues
MNKRLFLVCPLLSLLLCISFPASSCWALASNNIPLDSPLYGYLDKLAGYGLIGSDFKGIRPFSKAEAARLLQEAQGNIQQ
SPDPVPPLVAQLMVRIRELIPREASLREQPDMKPPLISFDPKSSMRLRYAYLDGTPRNYKRQVHDPGDDGVFGIGSGLRP
KNPYPSPATQRGSEGTPLMANNNGIVYREGHNAELRWAVEGHLGGDVSGLLETSLLYSKSGSDADLELNRGYVKLGGGSL
ELEAGKDENWLGLGYRGAITLSNNAENMTQVKLSSPEPFRVKYVGDMKFALIGSRLDKTVTDGEERQPWFYALKLSAKPT
SNLEIGFNLGRQVGGPGVNNSLGDMVRGLVGGTGADNSNGMAGFEMRYRIPWLRNTELYGEFSGEDTAAFWPIVESYLAG
IYIPRLTSDGKNDFRFEFFQGNRILYTNSTFPAGYLYKNMPIGHSQGGATRDYYSRFCHWFGVRNNLALEYIYTTRGESG
RMPGQAVEYKHAGRVSWTLPVYGDLDAQATYGIEKVSNLNLENGDDRTNQLVSIELRYRY
>Mature_540_residues
MNKRLFLVCPLLSLLLCISFPASSCWALASNNIPLDSPLYGYLDKLAGYGLIGSDFKGIRPFSKAEAARLLQEAQGNIQQ
SPDPVPPLVAQLMVRIRELIPREASLREQPDMKPPLISFDPKSSMRLRYAYLDGTPRNYKRQVHDPGDDGVFGIGSGLRP
KNPYPSPATQRGSEGTPLMANNNGIVYREGHNAELRWAVEGHLGGDVSGLLETSLLYSKSGSDADLELNRGYVKLGGGSL
ELEAGKDENWLGLGYRGAITLSNNAENMTQVKLSSPEPFRVKYVGDMKFALIGSRLDKTVTDGEERQPWFYALKLSAKPT
SNLEIGFNLGRQVGGPGVNNSLGDMVRGLVGGTGADNSNGMAGFEMRYRIPWLRNTELYGEFSGEDTAAFWPIVESYLAG
IYIPRLTSDGKNDFRFEFFQGNRILYTNSTFPAGYLYKNMPIGHSQGGATRDYYSRFCHWFGVRNNLALEYIYTTRGESG
RMPGQAVEYKHAGRVSWTLPVYGDLDAQATYGIEKVSNLNLENGDDRTNQLVSIELRYRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59854; Mature: 59854

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRLFLVCPLLSLLLCISFPASSCWALASNNIPLDSPLYGYLDKLAGYGLIGSDFKGIR
CCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEECCCCCCCC
PFSKAEAARLLQEAQGNIQQSPDPVPPLVAQLMVRIRELIPREASLREQPDMKPPLISFD
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC
PKSSMRLRYAYLDGTPRNYKRQVHDPGDDGVFGIGSGLRPKNPYPSPATQRGSEGTPLMA
CCCCCEEEEEEECCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
NNNGIVYREGHNAELRWAVEGHLGGDVSGLLETSLLYSKSGSDADLELNRGYVKLGGGSL
CCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHEECCCCCCCEEECCCEEEECCCEE
ELEAGKDENWLGLGYRGAITLSNNAENMTQVKLSSPEPFRVKYVGDMKFALIGSRLDKTV
EEECCCCCCEEEECEEEEEEECCCCCCEEEEEECCCCCEEEEEECCEEEEEHHHHHHHHC
TDGEERQPWFYALKLSAKPTSNLEIGFNLGRQVGGPGVNNSLGDMVRGLVGGTGADNSNG
CCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
MAGFEMRYRIPWLRNTELYGEFSGEDTAAFWPIVESYLAGIYIPRLTSDGKNDFRFEFFQ
CEEEEEEEECCCEECCEEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEE
GNRILYTNSTFPAGYLYKNMPIGHSQGGATRDYYSRFCHWFGVRNNLALEYIYTTRGESG
CCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCC
RMPGQAVEYKHAGRVSWTLPVYGDLDAQATYGIEKVSNLNLENGDDRTNQLVSIELRYRY
CCCCHHCCCCCCCEEEEEEEEEECCCCCHHCCHHHHHCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MNKRLFLVCPLLSLLLCISFPASSCWALASNNIPLDSPLYGYLDKLAGYGLIGSDFKGIR
CCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEECCCCCCCC
PFSKAEAARLLQEAQGNIQQSPDPVPPLVAQLMVRIRELIPREASLREQPDMKPPLISFD
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC
PKSSMRLRYAYLDGTPRNYKRQVHDPGDDGVFGIGSGLRPKNPYPSPATQRGSEGTPLMA
CCCCCEEEEEEECCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
NNNGIVYREGHNAELRWAVEGHLGGDVSGLLETSLLYSKSGSDADLELNRGYVKLGGGSL
CCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHEECCCCCCCEEECCCEEEECCCEE
ELEAGKDENWLGLGYRGAITLSNNAENMTQVKLSSPEPFRVKYVGDMKFALIGSRLDKTV
EEECCCCCCEEEECEEEEEEECCCCCCEEEEEECCCCCEEEEEECCEEEEEHHHHHHHHC
TDGEERQPWFYALKLSAKPTSNLEIGFNLGRQVGGPGVNNSLGDMVRGLVGGTGADNSNG
CCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
MAGFEMRYRIPWLRNTELYGEFSGEDTAAFWPIVESYLAGIYIPRLTSDGKNDFRFEFFQ
CEEEEEEEECCCEECCEEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEE
GNRILYTNSTFPAGYLYKNMPIGHSQGGATRDYYSRFCHWFGVRNNLALEYIYTTRGESG
CCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCC
RMPGQAVEYKHAGRVSWTLPVYGDLDAQATYGIEKVSNLNLENGDDRTNQLVSIELRYRY
CCCCHHCCCCCCCEEEEEEEEEECCCCCHHCCHHHHHCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA